get_marker_genes {SC3} | R Documentation

## Calculate marker genes

### Description

Find marker genes in the dataset. The `get_auroc` is used to calculate marker values for each gene.

### Usage

    get_marker_genes(dataset, labels)

### Arguments

`dataset` | expression matrix
`labels` | cell labels corresponding clusters

### Value

data.frame containing the marker genes, corresponding cluster indexes and adjusted `p-value`s

### Examples

    d <- get_marker_genes(yan[1:10,], as.numeric(ann[,1]))
    d

[Package SC3 version 1.16.0 Index]