.createFlags {Rhisat2} | R Documentation

## Create flags

### Description

Given a named list of argument values, generate a single character string containing all arguments and values, separated by single spaces. Logical values imply that the argument is either included (without a value) or excluded in the character string. For vector-valued arguments, the values will be comma separated in the final string.

### Usage

    .createFlags(flagList)

### Arguments

`flagList` | A named list of argument values. Vectors will be collapsed and separated by a comma.

### Details

Adapted from the Rbowtie package

### Value

A character string with the arguments and their values.

[Package Rhisat2 version 1.4.0 Index]