createProfileFromOma {PhyloProfile} | R Documentation

## Create a phylogenetic profile from a raw OMA dataframe

### Description

Create a phylogenetic profile from a raw OMA dataframe

### Usage

    createProfileFromOma(finalOmaDf = NULL)

### Arguments

`finalOmaDf` | raw OMA data for a list of proteins (see ?getDataForOneOma)

### Value

Dataframe of the phylogenetic profiles in long format, which contains the seed protein IDs, their orthologous proteins and the corresponding taxononmy IDs of the orthologs.

### Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

### See Also

`getDataForOneOma`

### Examples

    print("Uncomment the following lines to run the function")
    # omaData <- getDataForOneOma("HUMAN29397", "OG")
    # createProfileFromOma(omaData)

[Package PhyloProfile version 1.2.8 Index]