getAllDomainsOma {PhyloProfile} | R Documentation

## Create domain annotation dataframe from a raw OMA dataframe

### Description

Create domain annotation dataframe from a raw OMA dataframe

### Usage

    getAllDomainsOma(finalOmaDf = NULL)

### Arguments

`finalOmaDf` | raw OMA data for a list of proteins (see ?getDataForOneOma)

### Value

Dataframe of the domain annotation used for PhyloProfile, which contains seed IDs, ortholog IDs, ortholog lengths, annotated features, start and end positions of those features.

### Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

### See Also

`getDataForOneOma`

### Examples

    print("Uncomment the following line to run the function")
    # omaData <- getDataForOneOma("HUMAN29397", "OG")
    # getAllDomainsOma(omaData)

[Package PhyloProfile version 1.2.8 Index]