STAR.install {ORFik} | R Documentation

## Download and prepare STAR

### Description

Will not run "make", only use precompiled STAR file.
Can only run on unix systems (Linux and Mac), and requires minimum 30GB memory on genomes like human, rat, zebrafish etc.

### Usage

    STAR.install(folder = "~/bin", version = "2.7.4a")

### Arguments

`folder` | path to folder for download, fille will be named "STAR-version", where version is version wanted.
`version` | default "2.7.4a"

### Value

path to runnable STAR

### References

https://www.ncbi.nlm.nih.gov/pubmed/23104886

### See Also

Other STAR: `STAR.align.folder()`, `STAR.align.single()`, `STAR.index()`, `STAR.multiQC()`, `STAR.remove.crashed.genome()`, `getGenomeAndAnnotation()`, `install.fastp()`

### Examples

    #STAR.install("~/bin", version = "2.7.4a")

[Package ORFik version 1.8.6 Index]