mulOptPlot {Mulcom} | R Documentation

## MulCom optimization Plot

### Description

MulCom optimization Plot to identify best configuration paramters

### Usage

       mulOptPlot(M.Opt, ind, th, smooth = "NO")

### Arguments

`M.Opt` | an MulCom optimization object
`ind` | index corresponding to the comparison to plot
`th` | a threshold for the FDR plot
`smooth` | indicates whether the FDR plot will show a significant threshold or will be continuous.

### Details

`mulOptPlot` MulCom optimization Plot

### Value

a numeric vector

### Author(s)

Claudio Isella, claudio.isella@ircc.it

### Examples

       data(benchVign)
       mulcom_perm <- mulPerm(Affy, Affy$Groups, 10,2)
       mulcom_opt <- mulOpt(mulcom_perm, vm=seq(0.1, 0.5, 0.1), vt=seq(1, 3,1))
       mulOptPlot(mulcom_opt, 1, 0.05)

[Package Mulcom version 1.38.0 Index]