InTADSig                The InTADSig Class
combineInTAD            Preparation for correlation analysis
enhSel                  Enhancer signals subset detected from
                        medulloblatoma samples
enhSelGR                Genomic coordiantes of enhancer signals subet
exprs,InTADSig-method   Gene expression counts table
filterGeneExpr          Function to filter gene expression
findCorrelation         Function to perfrom correlation analysis
fnSE                    Preparation for correlation analysis for a
                        signal
geneCoords              Gene coords GRanges
get.enr.bg.normfit      Function to estimate gene expression
loadSigInTAD            Load InTADSig object from text files
mbAnnData               Data frame containing information about
                        sampless
newSigInTAD             Create InTADSig object
plotCorAcrossRef        Function to plot correlation across genome
plotCorrelation         Function to plot correlation
rpkmCountsSel           Gene expression subset from medulloblastoma
                        samples
sigCoords               Signal coords GRanges
signals                 Signal values table
tadGR                   Genomic coordiantes of topologically associated
                        domains
txsSel                  Genomic coordiantes of genes subset
