cooler {HiCcompare} | R Documentation

## Hi-C data in the cooler format

### Description

Contains Hi-C data for the entire genome from the Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool file.

### Usage

    cooler

### Format

A matrix with 4011620 rows and 7 columns in BEDPE format.

### Value

A matrix.

### Source

Data from the Index of Coolers. ftp://cooler.csail.mit.edu/coolers/hg19/Dixon2012-H1hESC-HindIII-allreps-filtered.1000kb.cool

[Package HiCcompare version 1.10.0 Index]