Package: EpiDISH
Title: Epigenetic Dissection of Intra-Sample-Heterogeneity
Version: 2.4.0
Description: EpiDISH is a R package to infer the proportions of a
        priori known cell-types present in a sample representing a
        mixture of such cell-types. Right now, the package can be used on DNAm 
        data of whole blood, generic epithelial tissue and breast tissue. 
        Besides, the package provides a function that allows 
        the identification of differentially methylated cell-types and their 
        directionality of change in Epigenome-Wide Association Studies.
Date: 2020-03-01
Author: Andrew E. Teschendorff <a.teschendorff@ucl.ac.uk>, Shijie C.
        Zheng<shijieczheng@gmail.com>
Maintainer: Shijie Charles Zheng<shijieczheng@gmail.com>
Depends: R (>= 3.5)
Imports: MASS, e1071, quadprog, parallel, stats, matrixStats, stringr,
        locfdr
Suggests: roxygen2, GEOquery, BiocStyle, knitr, rmarkdown, Biobase,
        testthat
VignetteBuilder: knitr
License: GPL-2
LazyData: true
RoxygenNote: 7.0.2
URL: https://github.com/sjczheng/EpiDISH
BugReports: https://github.com/sjczheng/EpiDISH/issues
biocViews: DNAMethylation, MethylationArray, Epigenetics,
        DifferentialMethylation, ImmunoOncology
git_url: https://git.bioconductor.org/packages/EpiDISH
git_branch: RELEASE_3_11
git_last_commit: f7bf105
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 05:33:27 UTC; biocbuild
Built: R 4.0.0; ; 2020-04-28 17:47:14 UTC; windows
