deepblue_select_annotations {DeepBlueR} | R Documentation

## select_annotations

### Description

Select regions from the Annotations that match the selection criteria.

### Usage

    deepblue_select_annotations(annotation_name = NULL, genome = NULL,
      chromosome = NULL, start = NULL, end = NULL,
      user_key = deepblue_options("user_key"))

### Arguments

`annotation_name` | - A string or a vector of string (name(s) of selected annotation(s))
`genome` | - A string (the target genome)
`chromosome` | - A string or a vector of string (chromosome name(s))
`start` | - A int (minimum start region)
`end` | - A int (maximum end region)
`user_key` | - A string (users token key)

### Value

id - A string (query id)

### See Also

Other Operating on the data regions: `deepblue_aggregate`, `deepblue_binning`, `deepblue_count_regions`, `deepblue_coverage`, `deepblue_distinct_column_values`, `deepblue_extend`, `deepblue_filter_regions`, `deepblue_flank`, `deepblue_get_experiments_by_query`, `deepblue_get_regions`, `deepblue_input_regions`, `deepblue_intersection`, `deepblue_merge_queries`, `deepblue_overlap`, `deepblue_query_cache`, `deepblue_query_experiment_type`, `deepblue_score_matrix`, `deepblue_select_experiments`, `deepblue_select_regions`, `deepblue_tiling_regions`

### Examples

    deepblue_select_annotations(
        annotation_name = "Cpg Islands",
        genome = "hg19",
        chromosome = "chr1",
        start = 0,
        end = 2000000)

[Package DeepBlueR version 1.14.0 Index]