6860b8d3a9a15e8882bd37d9ecf96e84 *CITATION
57ac2f8ce4c83b4a1333ebb25e3693c7 *DESCRIPTION
6d9a97b0a78362a7ca8105e9c87c36d8 *INDEX
9b87d62c6ece5f3d18e503da55d2fabd *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
6a37c7fb559a4639e51c9436f8839ba7 *Meta/hsearch.rds
aa20b5e56c683988a92076aaabd41b78 *Meta/links.rds
740555277ccc953fe10ed108fd5cc5bf *Meta/nsInfo.rds
bd66542d8e523fae386a5e0ed5b90dab *Meta/package.rds
285fd2ec75c232a4b9dc83b1af1178b3 *Meta/vignette.rds
e73ebcfcb0c28040e4178b69f9ebedf6 *NAMESPACE
b7bca2119044e100b779753a53f8545a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CNVRanger
9bbc7954059449d23da6064b64918898 *R/CNVRanger.rdb
ac81361855787bd333a541ba16c65ff3 *R/CNVRanger.rdx
e16d8be251bbe45d6147f11cc8e46f3e *doc/CNVRanger.R
aa2e1afef0a4135f78a53ce20c5308c1 *doc/CNVRanger.Rmd
f42172732a0851ac7afa46b0dc7f6933 *doc/CNVRanger.html
62d8a52b9a30efa127c214852ac82ec2 *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
1eebb7f4b33675b2bac6cc8e1ab0d4b6 *help/AnIndex
dbef83baa5707ec8846e2fbed2aa97aa *help/CNVRanger.rdb
818098eed0bdb95d8ad0f3df0601f2bb *help/CNVRanger.rdx
be928f55fedab30e588b4695fa3f46c3 *help/aliases.rds
71eec44eaa5bd8a4c8b5dba028531f32 *help/paths.rds
1464188ffe186e2e1fa39fdeaf7c13e5 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
25f8afa41bb9918602c543ae6dfae277 *html/cnvEQTL.html
ad1e438adf73930b7586faa16c7fbfdd *html/cnvGWAS.html
37c1237d3056c8b3eb2d26b45f0f105f *html/cnvOncoPrint.html
bdd72b144d73daa4fa80af893c14caa1 *html/generateGDS.html
675eee91122e3070712f90f4e10574b3 *html/importLrrBaf.html
d0693f0e866c80f02ae65e1f005904fe *html/plotEQTL.html
582fcb443860332d673b32e82178a365 *html/plotManhattan.html
13b7155ec52c791a190ffa6fc58438a9 *html/plotRecurrentRegions.html
8ff0f5a6e547e91516be6a1bf3cd9130 *html/populationRanges.html
fd1569cf33b4d1a6292ed488ce5ab740 *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
