downloadMiRecords {CHRONOS} | R Documentation

## Download miRNA-mRNA interactions for an organism.

### Description

Download miRNA-mRNA interactions for an organism.

### Usage

    downloadMiRecords(org, pn, update, databases)

### Arguments

`org` | KEGG organism identifier.
`pn` | Number of databases that verify miRNA-mRNA interactions.
`update` | Download preprocessed data (update=FALSE) or new data from miRecords (update=TRUE).
`databases` | Specify which miRNA-mRNA interaction databases will be used.

### Details

miRecords is a resource for animal miRNA-target interactions. The Predicted Targets component of miRecords is an integration of predicted miRNA targets produced by 11 established miRNA target prediction tools, namely DIANA-microT, MicroInspector, miRanda, MirTarget2, miTarget, NBmiRTar, PicTar, PITA, RNA22, RNAhybrid, and TargetScan/TargertScanS.

### Value

Downloaded data is stored in CHRONOS/extdata/Downloads/miRecords/<org>/miRNATargets.RData

### References

- http://c1.accurascience.com/miRecords

### Examples

    # Load extracted linear subpathways from toy data
    load(system.file('extdata', 'Examples//data.RData', package='CHRONOS'))

    ## Not run: downloadMiRecords(org='hsa', pn=5, update=FALSE, databases='All')

[Package CHRONOS version 1.16.0 Index]