plot.hanabi {CAGEr} | R Documentation

## Plotting Hanabi objects

### Description

S3 method to plot hanabi objects. Used by the `hanabiPlot` function.

### Usage

    ## S3 method for class 'hanabi'
    plot(x, alpha = 0.5, col = "black",
      xlab = "Total counts", ylab = "Unique features",
      main = "Hanabi plot", pch = 1, ...)

    ## S3 method for class 'hanabi'
    points(x, ...)

    ## S3 method for class 'hanabi'
    lines(x, ...)

### Arguments

`x` | The hanabi object to plot.
`alpha` | The alpha transparency of the plot lines.
`col` | A vector indicating a color per sample (or a vector that can be recycled that way).
`xlab` | Horizontal axis label.
`ylab` | Vertical axis label.
`main` | Plot title.
`pch` | Plot character at the tip of the lines.
`...` | Other parameters passed to the generic plot, points or lines functions.

### Author(s)

Charles Plessy

### See Also

Other CAGEr richness functions: `hanabiPlot`, `hanabi`

[Package CAGEr version 1.30.3 Index]