Package: ASpediaFI
Type: Package
Title: ASpedia-FI: Functional Interaction Analysis of Alternative
        Splicing Events
Version: 1.2.0
Date: 2020-04-01
Author: Doyeong Yu, Kyubin Lee, Daejin Hyung, Soo Young Cho, Charny Park
Maintainer: Doyeong Yu <parklab.bi@gmail.com>
Description: This package provides functionalities for a systematic and integrative analysis of alternative splicing events and their functional interactions. 
License: GPL-3
Encoding: UTF-8
biocViews: AlternativeSplicing, Annotation, Coverage, GeneExpression,
        GeneSetEnrichment, GraphAndNetwork, KEGG, Network,
        NetworkInference, Pathways, Reactome, Transcription,
        Sequencing, Visualization
LazyData: false
RoxygenNote: 6.1.1
Depends: R (>= 3.6.0), SummarizedExperiment, ROCR
Imports: BiocParallel, GenomicAlignments, GenomicFeatures,
        GenomicRanges, IRanges, IVAS, Rsamtools, biomaRt, limma,
        S4Vectors, stats, DRaWR, GenomeInfoDb, Gviz, Matrix, dplyr,
        fgsea, reshape2, igraph, graphics, e1071, methods, rtracklayer,
        scales, grid, ggplot2, mGSZ, utils
Suggests: knitr
VignetteBuilder: knitr
BugReports: https://github.com/nachoryu/ASpediaFI
git_url: https://git.bioconductor.org/packages/ASpediaFI
git_branch: RELEASE_3_11
git_last_commit: 3f0676c
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 07:25:23 UTC; biocbuild
Built: R 4.0.0; ; 2020-04-28 18:15:06 UTC; windows
