Package: ADAM
Type: Package
Title: ADAM: Activity and Diversity Analysis Module
Version: 1.4.0
Date: 2018-10-5
Author: André Luiz Molan <andre.molan@unesp.br>, 
    Giordano Bruno Sanches Seco <giordano.bruno@unesp.br>,
    Agnes Alessandra Sekijima Takeda <agnes.takeda@unesp.br>, 
    Jose Luiz Rybarczyk Filho <jose.luiz@unesp.br>
Maintainer: Jose Luiz Rybarczyk Filho <jose.luiz@unesp.br>
Description: ADAM is a GSEA R package created to group a set of genes from
    comparative samples (control versus experiment) belonging to different
    species according to their respective functions (Gene Ontology and KEGG
    pathways as default) and show their significance by calculating p-values
    referring togene diversity and activity. Each group of genes is called GFAG
    (Group of Functionally Associated Genes). 
Depends: R(>= 3.5), stats, utils, methods
Imports: Rcpp (>= 0.12.18), GO.db (>= 3.6.0), KEGGREST (>= 1.20.2),
        knitr, pbapply (>= 1.3-4), dplyr (>= 0.7.6), DT (>= 0.4),
        stringr (>= 1.3.1), SummarizedExperiment (>= 1.10.1)
Suggests: testthat
LinkingTo: Rcpp
SystemRequirements: C++11
Encoding: UTF-8
RoxygenNote: 6.1.0
LazyData: TRUE
License: GPL (>= 2)
biocViews: GeneSetEnrichment, Pathways, KEGG
VignetteBuilder: knitr
LazyLoad: yes
NeedsCompilation: yes
git_url: https://git.bioconductor.org/packages/ADAM
git_branch: RELEASE_3_11
git_last_commit: e96a9d6
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
Packaged: 2020-04-28 06:29:46 UTC; biocbuild
Built: R 4.0.0; i386-w64-mingw32; 2020-04-28 18:04:13 UTC; windows
Archs: i386, x64
