Package: safe
Title: Significance Analysis of Function and Expression
Version: 3.8.0
Author: William T. Barry
Description: SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.
Depends: R (>= 2.4.0), AnnotationDbi, Biobase, methods, SparseM
Suggests: GO.db, PFAM.db, reactome.db, hgu133a.db, breastCancerUPP,
        survival, foreach, doRNG, Rgraphviz, GOstats
Maintainer: William T. Barry <bbarry@jimmy.harvard.edu>
License: GPL (>= 2)
biocViews: DifferentialExpression, Pathways, GeneSetEnrichment,
        StatisticalMethod, Software
NeedsCompilation: no
Packaged: 2015-04-17 02:45:31 UTC; biocbuild
Built: R 3.2.0; ; 2015-04-17 13:03:52 UTC; windows
