# Bayesian Piecewise Constant Regression for DNA copy number estimation

## Documentation for package ‘mBPCR’ version 1.22.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

computeMBPCR | Estimate the copy number profile
estGlobParam | Estimate global parameters of copy number data
estProfileWithMBPCR | Estimate and print the copy number profile of some chromosomes of a sample
estProfileWithMBPCRforOligoSnpSet | Estimate and print the copy number profile of some chromosomes of samples in an oligoSnpSet object
importCNData | Import the copy number data
jekoChr11Array250Knsp | Affymetrix GeneChip Mapping 250K NSP Array data of JEKO-1 cell line (chr. 11)
logAdd | Overflow-safe computation of the logarithm of a sum
plotEstProfile | Plot the estimated profile of copy number data
rec10k | Affymetrix GeneChip Mapping 10K Array data of REC-1 cell line
writeEstProfile | Write the estimated profile of copy number data