annotationListToMatrix	gene2set
clusterMethods	cogena_methods
clusterMethods,cogena-method	cogena_methods
clusterMethods,cogena_methods	cogena_methods
clusters	cogena_methods
clusters,cogena-method	cogena_methods
clusters,cogena_methods	cogena_methods
cogena	cogena
cogena-class	cogena_class
corInCluster	corInCluster
corInCluster,cogena-method	corInCluster
corInCluster,cogena_methods	corInCluster
DEexprs	DEexprs
enrichment	enrichment
enrichment,cogena-method	enrichment
enrichment,cogena_methods	enrichment
gene2set	gene2set
geneExpInCluster	geneExpInCluster
geneExpInCluster,cogena-method	geneExpInCluster
geneExpInCluster,cogena_methods	geneExpInCluster
geneInCluster	geneInCluster
geneInCluster,cogena-method	geneInCluster
geneInCluster,cogena_methods	geneInCluster
gmt2list	gmt2list
heatmap.3	heatmap.3
heatmapCluster	heatmapCluster
heatmapCluster,cogena-method	heatmapCluster
heatmapPEI	heatmapPEI
heatmapPEI,cogena	heatmapPEI
heatmapPEI,cogena-method	heatmapPEI
heatmapPEI2	heatmapPEI2
heatmapPEI2,cogena	heatmapPEI2
heatmapPEI2,cogena-method	heatmapPEI2
hubgeneInCluster	hubgeneInCluster
hubgeneInCluster,cogena-method	hubgeneInCluster
mat	cogena_methods
mat,cogena-method	cogena_methods
mat,cogena_methods	cogena_methods
nClusters	cogena_methods
nClusters,cogena-method	cogena_methods
nClusters,cogena_methods	cogena_methods
optCluster	optCluster
optCluster,cogena	optCluster
optCluster,cogena-method	optCluster
PD	PD
PD,DEexprs,sampleLabel,cogena_result	PD
PEI	PEI
plot.sota	sota
print.sota	sota
sampleLabel	sampleLabel
sota	sota
summary,cogena-method	cogena_methods
vClusters	vClusters
