# Merge Maid

## Documentation for package ‘MergeMaid’ version 2.40.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

AverageDuplicates | Merge gene expression data sets
check | Merge gene expression data sets
check.length | Class mergeCoeff, a class for storing regression coefficients.
coeff | Class mergeCoeff, a class for storing regression coefficients.
coeff-method | Class mergeCoeff, a class for storing regression coefficients.
coeff<- | Class mergeCoeff, a class for storing regression coefficients.
coeff<--method | Class mergeCoeff, a class for storing regression coefficients.
exprs-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
exprs<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames<- | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneNames<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy<- | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
geneStudy<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
hist | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
hist-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
intCor | Correlation of Correlations
intCor-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
intcorDens | plot of density functions of integrative correlations
intcorDens-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
integrative.cors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
integrative.cors-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
intersection | ExpressionSet with all common genes in a mergeExpressionSet
intersection-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
isna | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
length-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
maxcors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
maxcors-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
maxintcor | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeCoeff | Class mergeCoeff, a class for storing regression coefficients.
mergeCoeff-class | Class mergeCoeff, a class for storing regression coefficients.
mergeCor | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
mergeCor-class | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
mergeData | MergeMaid instance data for merging
mergeExpressionSet | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeExpressionSet-class | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
mergeExprs | Merge gene expression data sets
mergeget | Merge gene expression data sets
modelOutcome | Compare regression coefficients across studies
modelOutcome-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
names-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
names<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
notes-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
notes-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
notes<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
pairwise.cors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
pairwise.cors-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
phenoData-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
phenoData<--method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
plot | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
plot-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
plot-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
sample1 | MergeMaid instance data for merging
sample2 | MergeMaid instance data for merging
sample3 | MergeMaid instance data for merging
show-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
stdcoeff | Class mergeCoeff, a class for storing regression coefficients.
stdcoeff-method | Class mergeCoeff, a class for storing regression coefficients.
stdcoeff<- | Class mergeCoeff, a class for storing regression coefficients.
stdcoeff<--method | Class mergeCoeff, a class for storing regression coefficients.
subsetmES | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
summary-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
zscore | Class mergeCoeff, a class for storing regression coefficients.
zscore-method | Class mergeCoeff, a class for storing regression coefficients.
zscore<- | Class mergeCoeff, a class for storing regression coefficients.
zscore<--method | Class mergeCoeff, a class for storing regression coefficients.
[-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them