Package: M3D
Type: Package
Title: Identifies differentially methylated regions across testing
        groups.
Version: 1.3.4
Date: 2015-02-03
Author: Tom Mayo
Maintainer: Tom Mayo <t.mayo@ed.ac.uk>
Description: This package identifies statistically significantly differentially
    methylated regions of CpGs. It uses kernel methods (the Maxmimum Mean
    Discrepancy) to measure differences in methylation profiles, and relates
    these to inter-replicate changes, whilst accounting for variation in
    coverage profiles.
License: Artistic License 2.0
Imports: GenomicRanges, IRanges, BiSeq, parallel
Depends: R (>= 3.0.0)
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, RUnit, BiocGenerics
biocViews: DNAMethylation, DifferentialMethylation, Coverage, CpGIsland
NeedsCompilation: no
Packaged: 2015-06-09 05:28:36 UTC; biocbuild
Built: R 3.2.0; ; 2015-06-09 10:26:52 UTC; windows
