86ac0f4f0f0d6a8ae11dfa33bf9c93bc *CITATION
edb77cde1162cffa44bd0376c36d23db *DESCRIPTION
fc7420f6806b41baa25a3032daf216bf *INDEX
50f893c10885447ff3384d40a4e07321 *Meta/Rd.rds
72e21997bab0a06b92f6720779dea8b8 *Meta/data.rds
bc459026f02143f090f5d992df7e4e06 *Meta/hsearch.rds
041c27e81bd15bca34103521ca68e613 *Meta/links.rds
50979767b04ad54ddf7425d7e922f035 *Meta/nsInfo.rds
d0a9dd023b4c7ba6ec376027bb36d8a2 *Meta/package.rds
36497cce22ef51bb5a3627a3285f2133 *Meta/vignette.rds
29da47477988c46f89c3190d7c879478 *NAMESPACE
4e303551706f15b64a56cd310c25e237 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/GWASTools
4461e86e0cc3ea1585ed11e4ae21ab98 *R/GWASTools.rdb
c6f8634079cac3c516daf28b18b0dfa3 *R/GWASTools.rdx
c0bd24ffd3b1023868427ca76b29a1a4 *data/Rdata.rdb
7e6709f3eeac80cb5b91142522161f2e *data/Rdata.rds
59ca0837471821fe05664130fd192760 *data/Rdata.rdx
2664175a4bffa24daf405b55ed38534d *doc/Affymetrix.R
e6d2813ea4f16ec987a3e86abefe0fcd *doc/Affymetrix.Rnw
73022c2ef69274a5d07f5581f3560ab9 *doc/Affymetrix.pdf
7dffda7ce99e4935acfabcd0972530c9 *doc/DataCleaning.R
c10c913a6f0af36bb83d1b3fe9781596 *doc/DataCleaning.Rnw
13129505e647e7d8f9df0cfc42693fb8 *doc/DataCleaning.pdf
aaa76aa2c7ca0885b3d3aaa201766856 *doc/Formats.R
c8e1cb642b6b8c77d99ef167ac7db04a *doc/Formats.Rnw
e5ad5ec19a0a6c6efa6173699f34ac1c *doc/Formats.pdf
9230938d35dd14b4d479f3e45416b2ec *doc/index.html
51dd63198e376fac18ac4c64d5c20506 *help/AnIndex
2ae0bba5ef2fbd2ee0651bc5546a2177 *help/GWASTools.rdb
50c76ebbd32eb00c71d49d976438004b *help/GWASTools.rdx
f58b2b5b21b585b57240c2b335ff9c15 *help/aliases.rds
025b46c51f09e066e3bc76b91a52c1b5 *help/paths.rds
67c328f4469373bdb336bcfb63b4363f *html/00Index.html
0629445e5f3de06acbaf6e4013c7deca *html/R.css
157137fbcf6d29224c1efbece7b51202 *unitTests/BAFfromClusterMeans_test.R
97f3f44a2aec8d48f599eba2ccb40664 *unitTests/BAFfromGenotypes_test.R
2636556ac33adecb40c02c82f9ef59c0 *unitTests/GdsGenotypeReader_test.R
ba6ac1d5d0abda8998536bd01170027d *unitTests/GdsIntensityReader_test.R
7097c42d1e3ab8e4d43f9abb4fe8c74c *unitTests/GdsReader_test.R
8bf5453eeca517a1a255d6ccb4a64d50 *unitTests/GenotypeData_test.R
c6f9428a027a52be005e5d7ecee983cb *unitTests/IntensityData_test.R
a922b5aa0c19b9427e86fa7af948ba62 *unitTests/MatrixGenotypeReader_test.R
3d6a87709216345c3cc010bcc822bbc0 *unitTests/NcdfGenotypeReader_test.R
fa559973b54d74e1066b436e2fb691f5 *unitTests/NcdfIntensityReader_test.R
839f44e3a838eb92ad7913e6eee5a58b *unitTests/NcdfReader_test.R
fb7215b5cab8b63de06fe406b9567b85 *unitTests/ScanAnnotationDataFrame_test.R
31212b6719dbe4e1556ea81d2dc3550d *unitTests/ScanAnnotationSQLite_test.R
8eaed4ce544ba69271ec222a101762f1 *unitTests/SnpAnnotationDataFrame_test.R
fc684da1f017224562349f3a62e11dda *unitTests/SnpAnnotationSQLite_test.R
2f4cd0adad6ddb76d107c7cac3c1d4fd *unitTests/alleleFrequency_test.R
8d89dc9ff9002416ca4cfcb4d072fc54 *unitTests/allequal_test.R
57398362ee4a3abeff7db5717d36828d *unitTests/anomDetectBAF_test.R
dc188b62be9fa7f6cb0cb54f5ecff29b *unitTests/apartSnpSelection_test.R
8899c741b07b08c09dd967de65e0a143 *unitTests/assocCoxPH_test.R
c01738c53d2c75f375e26c99d3ac5413 *unitTests/assocRegression_test.R
4415b33312b12dc0aad7a79c4284de69 *unitTests/batchChisqTest_test.R
269d4403b40633b32467a08d2dd8c1ec *unitTests/batchFisherTest_test.R
a6ec6956cd202f981289f2b9f6adfefd *unitTests/checkGenotypeFile_test.R
dec86fc3ebcdb978897e0c1cdb60390c *unitTests/checkImputedDosageFile_test.R
0a579eb258041cd8ecbb6ed82242728d *unitTests/checkIntensityFile_test.R
171c24a2a4e4038d73a642c6c6150b6c *unitTests/chromIntensityPlot_test.R
48bae413e79fcd1110c66c6eba8b64f5 *unitTests/convertNcdfGds_test.R
e51c85fb21a072499d1b99f0329b8744 *unitTests/createAffyIntensityFile_test.R
8f4436bd5a72b21d3118995d8685ff5e *unitTests/createDataFile_test.R
44b050b164847c8aa28f12f0727afe67 *unitTests/dupDosageCorAcrossDatasets_test.R
b78877499bed31b4fa2ad54def012c9b *unitTests/duplicateDiscordanceAcrossDatasets_test.R
046dbd32f423031510439124bff5b347 *unitTests/duplicateDiscordance_test.R
c01e47f8548396cc7a02856b5d42c262 *unitTests/exactHWE_test.R
905598138226fdc90c7e5bd3f553c024 *unitTests/findBAFvariance_test.R
ddc32c5f7a3c0dfbadef89cbb81582d5 *unitTests/gdsSubsetCheck_test.R
c284ef07e909e7809a4e80ce107d9140 *unitTests/gdsSubset_test.R
79ca33a1ff1756d24ce2c1be4f8a329d *unitTests/genotypeToCharacter_test.R
30a56126cc8657ec956f96c87da4177e *unitTests/getobj_test.R
f8a135a1fcf3c0f383a1e60670baa28e *unitTests/hetByScanChrom_test.R
5a9474736f609b96247bc0b0a61342d6 *unitTests/hetBySnpSex_test.R
8d1d0e9acb8e973ad82b8e3f2ad88a88 *unitTests/ibdPlot_test.R
d49b60ed10f21c421110ae255693c2a6 *unitTests/imputedDosageFile_test.R
a15a23f3e5d975b61df1eb5b7c2c93b6 *unitTests/meanIntensityByScanChrom_test.R
41a5a01831ecd828cda4af98007c366e *unitTests/missingGenotypeByScanChrom_test.R
a3205fde64f25df663b03c972970a489 *unitTests/missingGenotypeBySnpSex_test.R
b27b180ad052d8be3b5dd15f47a8c43d *unitTests/ncdfSubset_test.R
75f2bc451229cdcd823fbe2619351b69 *unitTests/pedigreeCheck_test.R
378ec7ef99e27b32ab3741df3b06aeae *unitTests/pedigreeMaxUnrelated_test.R
7e5552ded02655b72a473d52713859ed *unitTests/pedigreePairwiseRelatedness_test.R
c8128f7c09110ca6e8af15dd09084388 *unitTests/plinkUtils_test.R
96ce42cffea1f48d7a72f03fa48ec01e *unitTests/pseudoautoIntensityPlot_test.R
86e76d76ab0a662c41685d45623639b0 *unitTests/qualityScoreByScan_test.R
64a23402e8040c62d420a6205dbec0df *unitTests/qualityScoreBySnp_test.R
87cce94804e502b6ffda8222fbdf875a *unitTests/saveas_test.R
960fcf5ebcaadb2919341f153ce525c2 *unitTests/setMissingGenotypes_test.R
dc43201f321aa4549c54dc290343d110 *unitTests/snpStats_test.R
527809d34652adb6a1d478efd50e21ae *unitTests/vcfWrite_test.R
