38b14bac27acfcc15bcf2ae04427defe *CITATION
8f98492a262d1ec5d8268325bb7206b5 *DESCRIPTION
ba86da674b3952ee25d0bb5a6a200df8 *INDEX
b39cc5a13c38a2e5cb83721a7b5969aa *Meta/Rd.rds
a68af0bff14a56bd455d67aa16f93305 *Meta/data.rds
a2455b59cc01f11711cb7dc893b55360 *Meta/hsearch.rds
71af67945830c47103aa4eeac73467aa *Meta/links.rds
54269f6fe8a4a34a2359e3ee271aebb2 *Meta/nsInfo.rds
db912f2b46564e6cb903d6ff47464dfc *Meta/package.rds
d9b2b4b5875c24a3494f7e8dc383e73c *Meta/vignette.rds
8cd7712153a539eb778f6db81b5a0a29 *NAMESPACE
9bf939e5f24e90ab021b9d7eeea22911 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/ChIPpeakAnno
d7519444772b1a40513251f192b8ffaf *R/ChIPpeakAnno.rdb
63ffa450e635143fd8cc81ea4ef208cf *R/ChIPpeakAnno.rdx
cd9ddac3695cc465aca76c73c97dcb09 *data/ExonPlusUtr.human.GRCh37.rda
8e9ecfe483bc1a3a9ddfa303eab223a5 *data/Peaks.Ste12.Replicate1.rda
ac3521f4b062658e1c513f51bce5487a *data/Peaks.Ste12.Replicate2.rda
129208051a1fe59d6eeed541cc4a0e28 *data/Peaks.Ste12.Replicate3.rda
1f72e6fdc6f424d51ef9a0a9fd47cde5 *data/TSS.human.GRCh37.rda
e8d4d3e3a91cd42adcf34ce018a65f55 *data/TSS.human.GRCh38.rda
a3adc6b31def1efc300fda0085005a5b *data/TSS.human.NCBI36.rda
0c3ef2fd321a47b9ed4d1a0ab63044ff *data/TSS.mouse.GRCm38.rda
f7a450954ac6d027fecb6780084976fb *data/TSS.mouse.NCBIM37.rda
7c615e60ca62bd77cfce469f30b28f7e *data/TSS.rat.RGSC3.4.rda
d1c0f799c823b46b4faf59a93f4f48db *data/TSS.rat.Rnor_5.0.rda
ba273cde7cce3343d816e625a393f9e2 *data/TSS.zebrafish.Zv8.rda
0b5cf3968954c7c36028169c301e5cfe *data/TSS.zebrafish.Zv9.rda
9f2f4ef11095f06779286d778e90b0f0 *data/annotatedPeak.rda
56dbce1227c556c82385420706bea259 *data/datalist
483b9cad06866b432d5e0accb6f21e63 *data/enrichedGO.rda
159b60aec18eca8caecd67e18382edef *data/myPeakList.rda
b1e1e9d6635e51e2f73d43db64ed9aa8 *doc/ChIPpeakAnno.R
771556b7ca719ae23756dde14671ae11 *doc/ChIPpeakAnno.Rnw
75d581fa56372533e9a6a6e77257c1ae *doc/ChIPpeakAnno.pdf
c607d40c4c9e2a4ad5d2fce7cc3e0e69 *doc/index.html
b3a45a5c00783c3c9ec7076c72f5cef8 *extdata/GFF_peaks.gff
bbd79f3bd4539df278d4d54a6a1c5b20 *extdata/GSM700906_AA86_vs_INPUT_WS170.bed
147f05d83bd1affe323c3166757e6d7f *extdata/GSM700907_DAF-12_TAP_vs_INPUT_#1_WS170.bed
622ff4061df9df9f9462f1fab72a63bd *extdata/GSM700908_DAF-12_TAP_vs_INPUT_#2_WS170.bed
70e0739a061fdcfdc7183e1cfd6b35a3 *extdata/GSM700909_DAF-12_TAP_vs_INPUT_#3_WS170.bed
df624d898cb0983b30ccc75aa043515c *extdata/MACS_output.bed
c198dabb98b6a234cc5dedf2257eb76e *extdata/MACS_peaks.xls
abf55e5af87269799387b8e534e54f2c *extdata/WS220.bed
41777d401dccd76ad16fdd4aec48141e *extdata/annotatedPeaks.2.10.0.rds
68ced04855781f8e713bbe6e579c20a3 *extdata/examplePattern.fa
37c4a0a35b151b8d32a1daee391c47a9 *extdata/gadem.rda
c2b7832fbd74395028b2e09c880e5bf3 *extdata/peaks_hg19.bed
9cae92f469e5acdf71a6195ee3de7479 *extdata/ref.gtf
9d5062a07d7c3e9db2e515494f35487c *extdata/test.bed
f756cd32fd364fd62be1257ea6525059 *help/AnIndex
df60867dd2412537752d02dab8402899 *help/ChIPpeakAnno.rdb
c35041fc44b13d8213c4b1c708c8fcd9 *help/ChIPpeakAnno.rdx
507c6d13f92f7a1405b75874f640b6e9 *help/aliases.rds
1554a1fc4a14069c995304ebb071ea9a *help/paths.rds
15d8bc68a3c8b02e22f568c460e0ca52 *html/00Index.html
0629445e5f3de06acbaf6e4013c7deca *html/R.css
2c488cfdb0359526e8bc7d24927bb377 *unitTests/test_addGeneIDs.R
cf462b2d0d4399115ca91a2822268540 *unitTests/test_annotatePeakInBatch.R
67b0c9b56f26f7688b7c2e3c7f76a4af *unitTests/test_assignChromosomeRegion.R
a182a89450e593cd5d2bc21063629aa8 *unitTests/test_binOverFeature.R
99e183de5ea59898900e5e7c694c2d9c *unitTests/test_findOverlapsOfPeaks.R
fa93fd2dd1183dd0eb7f0a8fcda8e18a *unitTests/test_getAllPeakSequence.R
c0414cb2a75ccb54ff92f6ce3a27bf92 *unitTests/test_getAnnotation.R
13ea05cba54a81a318551b3ef8b9a56b *unitTests/test_getVennCounts.R
a518ef4f2be751651b3eabd5211c38ff *unitTests/test_makeVennDiagram.R
3a9c74f84d980fb1a2f7874a17dd9cc0 *unitTests/test_peaksNearBDP.R
d8725195eabfe403fa803114187c71e6 *unitTests/test_toGRanges.R
cd90d500b1e3a6bb1ad333a60023dc29 *unitTests/test_write2FASTA.R
