gQTLstats-package	gQTLstats-package
cisAssoc	cisAssoc
clipPCs	clipPCs
clipPCs,SummarizedExperiment,numeric,logical-method	clipPCs
clipPCs,SummarizedExperiment,numeric,missing-method	clipPCs
directPlot	directPlot
enumerateByFDR	enumerateByFDR
eqBox2	eqBox2
eqDesc2	eqBox2
FDRsupp-class	FDRsupp-class
filtFDR	filtFDR
getFDRfunc	FDRsupp-class
getFDRfunc,FDRsupp-method	FDRsupp-class
getTab	FDRsupp-class
getTab,FDRsupp-method	FDRsupp-class
gQTLstats	gQTLstats-package
hmm878	hmm878
manhWngr	manhWngr
plot	senstab
plot.senstab	senstab
prep.cisAssocNB	gQTLstats-package
queryVCF	queryVCF
rawFDR	filtFDR
regressOut	clipPCs
sensByProbe	senstab
senstab	senstab
setFDRfunc	setFDRfunc
storeToFDR	storeToStats
storeToFDRByProbe	storeToStats
storeToHist	storeToStats
storeToMaxAssocBySNP	gQTLstats-package
storeToQuantiles	storeToStats
table.sensobj.thresh	gQTLstats-package
txsPlot	txsPlot
