Package: DiffBind
Type: Package
Version: 1.14.6
Title: Differential Binding Analysis of ChIP-Seq peak data
Author: Rory Stark<rory.stark@cruk.cam.ac.uk>, Gord Brown
        <gdbzork@gmail.com>
Maintainer: Rory Stark<rory.stark@cruk.cam.ac.uk>
Description: Compute differentially bound sites from multiple ChIP-seq
        experiments using affinity (quantitative) data. Also enables
        occupancy (overlap) analysis and plotting functions.
License: Artistic-2.0
LazyLoad: yes
Depends: R (>= 3.1.0), GenomicRanges, limma, GenomicAlignments, locfit
Imports: RColorBrewer, amap, edgeR (>= 2.3.58), gplots, grDevices,
        stats, utils, IRanges, zlibbioc, lattice, systemPipeR, tools
Suggests: DESeq, Rsamtools, DESeq2, BiocStyle
Enhances: rgl, parallel, BiocParallel, XLConnect
LinkingTo: Rsamtools (>= 1.19.38)
Collate: core.R parallel.R counts.R contrast.R analyze.R io.R helper.R
        utils.R cpp_wrapper.R DBA.R
biocViews: Sequencing, ChIPSeq, DifferentialPeakCalling
NeedsCompilation: yes
Packaged: 2015-09-11 03:17:59 UTC; biocbuild
Built: R 3.2.2; x86_64-apple-darwin13.4.0; 2015-09-11 14:25:52 UTC; unix
