ChIPseeker-package	ChIPseeker-package
addGeneAnno	addGeneAnno
annotatePeak	annotatePeak
as.data.frame.csAnno	as.data.frame.csAnno
as.GRanges	as.GRanges
ChIPseeker	ChIPseeker-package
covplot	covplot
csAnno-class	csAnno-class
downloadGEObedFiles	downloadGEObedFiles
downloadGSMbedFiles	downloadGSMbedFiles
enrichAnnoOverlap	enrichAnnoOverlap
enrichPeakOverlap	enrichPeakOverlap
getGenomicAnnotation	getGenomicAnnotation
getGEOgenomeVersion	getGEOgenomeVersion
getGEOInfo	getGEOInfo
getGEOspecies	getGEOspecies
getNearestFeatureIndicesAndDistances	getNearestFeatureIndicesAndDistances
getPromoters	getPromoters
getSampleFiles	getSampleFiles
getTagMatrix	getTagMatrix
gsminfo	info
info	info
overlap	overlap
peakHeatmap	peakHeatmap
plotAnnoBar	plotAnnoBar-methods
plotAnnoBar,csAnno,ANY-method	plotAnnoBar-methods
plotAnnoBar,csAnno-method	csAnno-class
plotAnnoBar,list-method	plotAnnoBar-methods
plotAnnoBar.data.frame	plotAnnoBar.data.frame
plotAnnoPie	plotAnnoPie-methods
plotAnnoPie,csAnno,ANY-method	plotAnnoPie-methods
plotAnnoPie,csAnno-method	csAnno-class
plotAnnoPie.csAnno	plotAnnoPie.csAnno
plotAvgProf	plotAvgProf
plotAvgProf2	plotAvgProf2
plotChrCov	plotChrCov
plotDistToTSS	plotDistToTSS-methods
plotDistToTSS,csAnno,ANY-method	plotDistToTSS-methods
plotDistToTSS,csAnno-method	csAnno-class
plotDistToTSS,list-method	plotDistToTSS-methods
plotDistToTSS.data.frame	plotDistToTSS.data.frame
readPeakFile	readPeakFile
seq2gene	seq2gene
show	show-methods
show,csAnno,ANY-method	show-methods
show,csAnno-method	csAnno-class
shuffle	shuffle
tagHeatmap	tagHeatmap
tagMatrixList	info
ucsc_release	info
vennpie	vennpie-methods
vennpie,csAnno-method	csAnno-class
vennplot	vennplot
vennplot.peakfile	vennplot.peakfile
