ChIPpeakAnno-package	ChIPpeakAnno-package
addAncestors	addAncestors
addGeneIDs	addGeneIDs
annotatedPeak	annotatedPeak
annotatePeakInBatch	annotatePeakInBatch
assignChromosomeRegion	assignChromosomeRegion
BED2RangedData	BED2RangedData
binOverFeature	binOverFeature
ChIPpeakAnno	ChIPpeakAnno-package
ChIPpeakAnno-deprecated	ChIPpeakAnno-deprecated
condenseMatrixByColnames	condenseMatrixByColnames
convert2EntrezID	convert2EntrezID
countPatternInSeqs	countPatternInSeqs
egOrgMap	egOrgMap
enrichedGO	enrichedGO
ExonPlusUtr.human.GRCh37	ExonPlusUtr.human.GRCh37
findOverlappingPeaks	findOverlappingPeaks
findOverlappingPeaks-deprecated	findOverlappingPeaks
findOverlapsOfPeaks	findOverlapsOfPeaks
findVennCounts	findVennCounts
getAllPeakSequence	getAllPeakSequence
getAnnotation	getAnnotation
getEnrichedGO	getEnrichedGO
getEnrichedPATH	getEnrichedPATH
getGeneSeq	getGeneSeq
getUniqueGOidCount	getUniqueGOidCount
getVennCounts	getVennCounts
GFF2RangedData	GFF2RangedData
hyperGtest	hyperGtest
makeVennDiagram	makeVennDiagram
myPeakList	myPeakList
Peaks.Ste12.Replicate1	Peaks.Ste12.Replicate1
Peaks.Ste12.Replicate2	Peaks.Ste12.Replicate2
Peaks.Ste12.Replicate3	Peaks.Ste12.Replicate3
peaksNearBDP	peaksNearBDP
summarizePatternInPeaks	summarizePatternInPeaks
toGRanges	toGRanges
translatePattern	translatePattern
TSS.human.GRCh37	TSS.human.GRCh37
TSS.human.GRCh38	TSS.human.GRCh38
TSS.human.NCBI36	TSS.human.NCBI36
TSS.mouse.GRCm38	TSS.mouse.GRCm38
TSS.mouse.NCBIM37	TSS.mouse.NCBIM37
TSS.rat.RGSC3.4	TSS.rat.RGSC3.4
TSS.rat.Rnor_5.0	TSS.rat.Rnor_5.0
TSS.zebrafish.Zv8	TSS.zebrafish.Zv8
TSS.zebrafish.Zv9	TSS.zebrafish.Zv9
write2FASTA	write2FASTA
