citHeader("To cite package 'DART' in publications use:")

citEntry(entry="Article",
        title = "DART: Denoising Algorithm based on Relevance network Topology improves molecular pathway activity inference.",
        author = "Y Jiao and K Lawler and GS Patel and A Purushotham and
others",
	doi = "10.1186/1471-2105-12-403",
	journal = "BMC Bioinformatics",
	pages = "403",
	url = "http://www.biomedcentral.com/1471-2105/12/403",
	volume = "12",
	year = "2011",
        textVersion = "Jiao Y, Lawler K, Patel GS, Purushotham A, Jones AF et al. (2011) DART: Denoising Algorithm based on Relevance network Topology improves molecular pathway activity inference. BMC Bioinformatics, 12:403"
        )

citEntry(entry="Article",
        title = "Denoising perturbation signatures reveals an actionable AKT-signaling gene module underlying a poor clinical outcome in endocrine treated ER+ breast cancer.",
        author = "Teschendorff AE, Li L, Yang Z",
	doi = "10.1186/s13059-015-0630-4",
	journal = "Genome Biology",
	pages = "61",
	url = "http://genomebiology.com/2015/16/1/61",
	volume = "16",
	year = "2015",
        textVersion = "Teschendorff AE, Li L, Yang Z. (2015) Denoising perturbation signatures reveals an actionable AKT-signaling gene module underlying a poor clinical outcome in endocrine treated ER+ breast cancer. Genome Biology 16:61"
        )

citEntry(entry="Article",
	note = "Additional citation for DART methods.",
        title = "Improved prognostic classification of breast cancer defined by antagonistic activation patterns of immune response pathway modules",
        author = "AE Teschendorff and S Gomez and A Arenas and D El-Ashry and M Schmidt and others",
	journal = "BMC Cancer",
	pages = "604",
	url= "http://www.biomedcentral.com/1471-2407/10/604",
	volume = "10",
	year = "2010",
        textVersion = "Teschendorff AE, Gomez S, Arenas A, El-Ashry D, Schmidt M, et al. (2010) Improved prognostic classification of breast cancer defined by antagonistic activation patterns of immune response pathway modules. BMC Cancer 10:604"
        )


#A BibTeX entry for LaTeX users is
#
#@Article{,
#	author = {Jiao, Yan and Lawler, Katherine and Patel, Gargi S and Purushotham, Arnie and Jones, Annette F and Grigoriadis, Anita and Tutt, Andrew and Ng, Tony and Teschendorff, Andrew E},
#	doi = {10.1186/1471-2105-12-403},
#	journal = {BMC Bioinformatics},
#	pages = {403},
#	title = {{DART: Denoising Algorithm based on Relevance network Topology improves molecular pathway activity inference}},
#	url = {http://www.biomedcentral.com/1471-2105/12/403},
#	volume = {12},
#	year = {2011}
#}
#
##Or to cite DART methods in publications:
#
#	1. Jiao Y, Lawler K, Patel GS, Purushotham A, Jones AF et al. (2011) DART: Denoising Algorithm based on Relevance network Topology improves molecular pathway activity inference. BMC Bioinformatics, 12:403
#
#	2. Teschendorff AE, Gomez S, Arenas A, El-Ashry D, Schmidt M, et al. (2010) Improved prognostic
#classification of breast cancer defined by antagonistic activation patterns of immune response
#pathway modules. BMC Cancer 10:604.

