Colorectal Cancer Gene Expression Analysis

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Documentation for package ‘curatedCRCData’ version 1.1.2

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curatedCRCData Clinically Annotated Data for the CRC Cancer Transcriptome
GSE11237_eset Celecoxib pre-treatment in human colorectal adenocarcinoma patients is associated with gene expression alterations suggestive of diminished cellular proliferation.
GSE12225.GPL3676_eset Integrating chromosomal aberrations and gene expression profiles to dissect rectal tumorigenesis.
GSE12945_eset An expression module of WIPF1-coexpressed genes identifies patients with favorable prognosis in three tumor types.
GSE13067_eset DNA copy-number alterations underlie gene expression differences between microsatellite stable and unstable colorectal cancers.
GSE13294_eset DNA copy-number alterations underlie gene expression differences between microsatellite stable and unstable colorectal cancers.
GSE14095_eset Gene expression signature and response to the use of leucovorin, fluorouracil and oxaliplatin in colorectal cancer patients.
GSE14333_eset Metastasis-Associated Gene Expression Changes Predict Poor Outcomes in Patients with Dukes Stage B and C Colorectal Cancer.
GSE16125.GPL5175_eset Integrative approach for prioritizing cancer genes in sporadic colon cancer.
GSE17536_eset Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer.
GSE17537_eset Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer.
GSE17538.GPL570_eset Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer.
GSE18105_eset MUC12 mRNA expression is an independent marker of prognosis in stage II and stage III colorectal cancer.
GSE2109_eset Expression Project for Oncology (expO)
GSE21510_eset Clinical significance of osteoprotegerin expression in human colorectal cancer.
GSE21815_eset Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers.
GSE24549.GPL5175_eset Transcriptome instability in colorectal cancer identified by exon microarray analyses: Associations with splicing factor expression levels and patient survival.
GSE24550.GPL5175_eset Transcriptome instability in colorectal cancer identified by exon microarray analyses: Associations with splicing factor expression levels and patient survival.
GSE2630_eset A gene signature of 8 genes could identify the risk of recurrence and progression in Dukes' B colon cancer patients.
GSE26682.GPL570_eset MRE11 deficiency increases sensitivity to poly(ADP-ribose) polymerase inhibition in microsatellite unstable colorectal cancers.
GSE26682.GPL96_eset MRE11 deficiency increases sensitivity to poly(ADP-ribose) polymerase inhibition in microsatellite unstable colorectal cancers.
GSE26906_eset Expression Profiles in Stage II Colon Cancer According to APC Gene Status.
GSE27544_eset Genome-wide profiling characterizes CRCs with genetic instability and specific routes to HLA class I loss and immunoescape
GSE28702_eset Potential responders to FOLFOX therapy for colorectal cancer by Random Forests analysis.
GSE3294_eset Comparative study of gene expression by cDNA microarray in human colorectal cancer tissues and normal mucosa.
GSE33113_eset Mutations in the Ras-Raf Axis underlie the prognostic value of CD133 in colorectal cancer.
GSE39582_eset Gene expression classification of colon cancer into molecular subtypes: characterization, validation, and prognostic value.
GSE3964_eset Deciphering cellular states of innate tumor drug responses.
GSE4045_eset Serrated carcinomas form a subclass of colorectal cancer with distinct molecular basis.
GSE4526_eset Gene expression signature for recurrence in stage III colorectal cancers.
GSE45270_eset AMC tubular and serrated adenomas
TCGA.COAD_eset Comprehensive molecular characterization of human colon and rectal cancer.
TCGA.READ_eset Comprehensive molecular characterization of human colon and rectal cancer.
TCGA.RNASeqV2.READ_eset Comprehensive molecular characterization of human colon and rectal cancer.
TCGA.RNASeqV2_eset Comprehensive molecular characterization of human colon and rectal cancer.