allelicTDT	allelicTDT
colEMlrt	colEMlrt
colGxE	colGxE
colGxEPerms	colGxE
colGxG	tdtGxG
colGxGPerms	colGxGPerms
colMAFtrio	removeSNPs
colPOlrt	colPOlrt
colTAT	colPOlrt
colTDT	tdt
colTDT2way	tdtGxG
colTDTebam	colTDTsam
colTDTinter2way	tdtGxG
colTDTmaxStat	colTDTmaxTest
colTDTmaxTest	colTDTmaxTest
colTDTsam	colTDTsam
compPermTDT2way	colGxGPerms
fastGxG	tdtGxG
fastGxGrec	tdtGxG
findLDblocks	findLDblocks
freq.hap	trio.data
getGxEstats	print.colGxE
getLD	getLD
getLDlarge	getLD
getMatPseudo	getMatPseudo
gtdt.ebam	colTDTsam
gtdt.stat	colTDTsam
LDdata	trio.data
lrControl	lrControl
mat.test	trio.data
orderSNPs	removeSNPs
ped2geno	ped2geno
plot.getLD	plot.getLD
plot.getLDlarge	plot.getLD
plot.LDblocks	plot.LDblocks
plot.trioFS	print.trioFS
plot.trioLR	plot.trioLR
poly4root	poly4root
poly4rootMat	poly4root
print.aTDT	allelicTDT
print.colEMlrt	colEMlrt
print.colGxE	print.colGxE
print.colTDT	tdt
print.colTDTepi	tdtGxG
print.LDblock	findLDblocks
print.maxScoreTrio	scoreTDT
print.maxStatTrio	colTDTmaxTest
print.maxTestTrio	colTDTmaxTest
print.polrt	colPOlrt
print.scoreGxE	scoreTDT
print.scoreTDT	scoreTDT
print.tat	colPOlrt
print.tdt	tdt
print.tdtEpi	tdtGxG
print.trio.power	trio.power
print.trioFS	print.trioFS
print.trioLR	print.trioLR
prob.mat.test	trio.data
probTDT	probTDT
read.pedfile	read.pedfile
removeSNPs	removeSNPs
removeTrios	removeSNPs
scoreGxE	scoreTDT
scoreGxG	scoreTDT
scoreMaxStat	scoreTDT
scoreTDT	scoreTDT
simuBkMap	trio.data
splitBlocks	findLDblocks
step3way	trio.data
tdt	tdt
tdt2way	tdtGxG
tdtGxG	tdtGxG
trio.check	trio.check
trio.data	trio.data
trio.gen.err	trio.data
trio.gen1	trio.data
trio.gen2	trio.data
trio.ped.err	trio.data
trio.ped1	trio.data
trio.ped2	trio.data
trio.permTest	trio.permTest
trio.power	trio.power
trio.prepare	trio.prepare
trio.sim	trio.sim
trioFS	trioFS
trioFS.default	trioFS
trioFS.formula	trioFS
trioFS.trioPrepare	trioFS
trioLR	trioLR
trioLR.default	trioLR
trioLR.formula	trioLR
trioLR.trioPrepare	trioLR
vcf2geno	vcf2geno
