37675dde1af402e1f4c1d8c3bae0ded6 *DESCRIPTION
b620ec61b24c4fd06128d17f9b8c8e7d *INDEX
86202033fd53114ab361cf4b2bb92d80 *Meta/Rd.rds
bb9ef6a5f6bc0f920ccf5abf1a2d75b4 *Meta/hsearch.rds
18c8d0f5a95ef40196004e9a50132234 *Meta/links.rds
bd694b9a42dcdf537dd35a1fc850b13e *Meta/nsInfo.rds
18e63c6910c20ea78ad080053c361fed *Meta/package.rds
d6a45cac7d3526f8b32b5efddeb3255a *Meta/vignette.rds
4fe80916f7f315cdd4734dfa104e7330 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/systemPipeR
688591e459a20da460eba1107875b190 *R/systemPipeR.rdb
4e10414331e207bcf653835be6ee8bf1 *R/systemPipeR.rdx
9c23edb800013e8de12341e024c0cbf3 *doc/index.html
f37d07d1b5f04421f7e90dadb86f6ee5 *doc/systemPipeChIPseq.R
dca327bc20ee86107632afb998a95f30 *doc/systemPipeChIPseq.Rnw
33ce9d11e2c19bc7d73f444bb1af8c77 *doc/systemPipeChIPseq.pdf
ddc06e55aebe55c0600ea8e15ee4b6d2 *doc/systemPipeR.R
7f908f44a35585d0d642fb76ff7dfc2e *doc/systemPipeR.Rnw
9fee3f4749b397b9931eda19633cb9b8 *doc/systemPipeR.pdf
16bd06fc61ad2492690f98259f3e0407 *doc/systemPipeRNAseq.R
e5986fc62ae16ba4ef212db21bb4a225 *doc/systemPipeRNAseq.Rnw
5516cd1fb45716771a1e8420d7361012 *doc/systemPipeRNAseq.pdf
315d2743047bfc127517e0f566eadca6 *doc/systemPipeVARseq.R
03e2a0d4b1bfbc33f536951f19c8da6e *doc/systemPipeVARseq.Rnw
9cc376a1f6954e667970eaff2c3ef5a8 *doc/systemPipeVARseq.pdf
78dda8645d323b468922f7e483be4c9c *extdata/alignStats.xls
f5aa719bd7af7fc126fdd61bf2d96855 *extdata/bowtiePE.param
fd5d4b6a0bd55c59a5006f7f31da32b8 *extdata/bowtieSE.param
aae4033870a0ef00a873be0b1b057f76 *extdata/bwa.param
784a3074752b394df008f0fb9e6ab9fc *extdata/countDFeByg.xls
78703d16e099b08f184a7b0cae1f08a0 *extdata/gatk.param
e344345ed1c0207ea72102040f73e277 *extdata/gatk_run.sh
9cca89e6cd2ea6e3b8a4e3037d2891e3 *extdata/rpkmDFeByg.xls
3d30cad15d64aebc718192ef099fecd5 *extdata/rsubread.param
205f33a7c2dfc67418ec0303621a141c *extdata/sambcf.param
94daf1174a2df769a353e2786243704f *extdata/sambcf_run.sh
f538b097c9d1298b0ad2ee12081327d0 *extdata/targets.txt
c7084088a32f4beab1eede51d7bb8685 *extdata/targetsPE.txt
271e9a808cf0872c3a4012f003658498 *extdata/tophat.param
a644ae5c093e3f1897c6f4ac05ad0191 *extdata/torque.tmpl
7a0cb0186bd92c87961227902ab2cae4 *extdata/trim.param
a7b2b7f0820a625e8511f521a6f54b97 *help/AnIndex
e7b716dee96db6d6a6c5a69684744f5d *help/aliases.rds
d90a5de83c3256106f1fe4fe76ed31d7 *help/paths.rds
580756ce02bce0654d1184c3147ff000 *help/systemPipeR.rdb
990a640d3955263e252454ec73b09e94 *help/systemPipeR.rdx
e9bac5ef1d7ba6331ebb4004d9c460f6 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
f02e326f800ee26f04df7961adbf7c0a *unitTests/SRR446027_1.fastq
f02e326f800ee26f04df7961adbf7c0a *unitTests/SRR446028_1.fastq
f02e326f800ee26f04df7961adbf7c0a *unitTests/SRR446029_1.fastq
f02e326f800ee26f04df7961adbf7c0a *unitTests/SRR446030_1.fastq
d3a1df6db3d820a1887c92b6385f113f *unitTests/targets.txt
48bb7620b0ea30ecde2cacf14e388025 *unitTests/test_classes.R
271e9a808cf0872c3a4012f003658498 *unitTests/tophat.param
