Package: customProDB
Type: Package
Title: Generate customized protein database from NGS data, with a focus
        on RNA-Seq data, for proteomics search.
Version: 1.6.0
Date: 2014-09-17
Author: xiaojing wang
Maintainer: xiaojing wang <xiaojing.wang@vanderbilt.edu>
Description: Generate customized protein sequence database from RNA-Seq
        data for proteomics search
License: Artistic-2.0
Depends: R (>= 3.0.1), IRanges, AnnotationDbi, biomaRt
Imports: IRanges, GenomicRanges, Rsamtools (>= 1.10.2),
        GenomicAlignments, Biostrings (>= 2.26.3), GenomicFeatures (>=
        1.17.13), biomaRt (>= 2.17.1), stringr, RCurl, plyr,
        VariantAnnotation (>= 1.7.28), rtracklayer, RSQLite,
        AnnotationDbi
Suggests: BSgenome.Hsapiens.UCSC.hg19
LazyLoad: yes
Packaged: 2014-10-14 04:29:49 UTC; biocbuild
biocViews: Proteomics
Built: R 3.1.1; ; 2014-10-14 07:46:14 UTC; windows
