# Conditional quantile normalization

## Documentation for package ‘cqn’ version 1.12.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

cqn | CQN (conditional quantile normalization) for RNA-Seq data
cqn.fixedlength | CQN (conditional quantile normalization) for RNA-Seq data
cqnplot | Plot the systematic effect estimated as part of a CQN normalization.~
montgomery.subset | Mongtomery RNA-seq data.
print.cqn | CQN (conditional quantile normalization) for RNA-Seq data
sizeFactors.subset | Mongtomery RNA-seq data.
uCovar | Mongtomery RNA-seq data.