Package: ballgown
Maintainer: Alyssa Frazee <alyssa.frazee@gmail.com>
Author: Alyssa C. Frazee, Andrew E. Jaffe, Leonardo Collado-Torres, Jeffrey T.
    Leek
Version: 1.0.4
License: Artistic-2.0
Title: Flexible, isoform-level differential expression analysis
Description: Tools for statistical analysis of assembled transcriptomes,
    including flexible differential expression analysis, visualization of
    transcript structures, and matching of assembled transcripts to annotation.
Depends: R (>= 3.0.0), methods
Imports: GenomicRanges (>= 1.17.25), IRanges (>= 1.99.22), S4Vectors
        (>= 0.1.2), RColorBrewer, splines, sva, limma, rtracklayer (>=
        1.25.13), Biobase (>= 2.25.0), GenomeInfoDb
Suggests: testthat, knitr
VignetteBuilder: knitr
biocViews: RNASeq, StatisticalMethod, Preprocessing,
        DifferentialExpression
Packaged: 2015-03-14 04:53:31 UTC; biocbuild
Built: R 3.1.3; ; 2015-03-14 05:53:38 UTC; windows
