67aa7d249f01b5131e5928f1df65a97f *CITATION
ae4445aeab7b332afc6c43967f5e642a *DESCRIPTION
fa911263c44d1dd0e22f906f3c6e1357 *INDEX
4e45023435c6eb6ffe241bd9185991fa *Meta/Rd.rds
dea0fa005fff14b7df91f61ddb27c8d3 *Meta/hsearch.rds
f48fd14f78d0ab06701a6d37477e4f39 *Meta/links.rds
7b038f00c7a921d7944eeb33f8206d2d *Meta/nsInfo.rds
c632f20e0ff99919babaa1ec2ac26c21 *Meta/package.rds
7be435cbb4d1d0a26e460d0a76ff1510 *Meta/vignette.rds
680e3ab4547043bd666dd4d260088d1e *NAMESPACE
68303aa4a276def68275168c57366723 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/VariantAnnotation
5cb5faea3b43fcf0c3d06a33393979d5 *R/VariantAnnotation.rdb
90d7172fed7f5092c0da66a7d5ee9664 *R/VariantAnnotation.rdx
d2290ee522cbb3c6f67e4073da54f289 *doc/VariantAnnotation.R
32cb6034dc600aee06d63c6f660dc532 *doc/VariantAnnotation.Rnw
a1334b71fa4f89b0d8031eae9890641e *doc/VariantAnnotation.pdf
c465e58e0ff84f6a2817c7669a95d69b *doc/filterVcf.R
03afeddc60c45b8fe3ca909e418bdfa6 *doc/filterVcf.Rnw
567fe6823359dbeec9faff4f6e6965a9 *doc/filterVcf.pdf
8bcf104cc9a2b662d0a6f75fca98453e *doc/index.html
be4950fb484e1070402e189e254b1a92 *extdata/chr22.vcf.gz
c303d8a0cc7e6314b5f42348221b0d3b *extdata/chr22.vcf.gz.tbi
a4ca21413e322997ed17c5429e65b9ca *extdata/chr7-sub.vcf.gz
dc5c0ecc784ff39509a164f3020b72f8 *extdata/chr7-sub.vcf.gz.tbi
00213792673cddfaf7ac9606dc226f14 *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
f2a805083bd71e155f977ffb49df2cd5 *extdata/h1187-10k.vcf.gz
fab30e49f0d054d462f8e1737844b204 *extdata/h1187-10k.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
987f9bc03cfb58c670519c35f4dba242 *help/AnIndex
d69cb3b337052b085f5bc4086b00b1ea *help/VariantAnnotation.rdb
f66b91a9f15855b095293af041d9b6e1 *help/VariantAnnotation.rdx
85419585435924fa4babfc5473e9130c *help/aliases.rds
44a25bc407e91a965a01d9791bce0afa *help/paths.rds
d0d281950addde25eb1e32bfded55f7f *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
80010ae0447ef9bf9f508bf5873247ae *libs/i386/VariantAnnotation.dll
6aadb0523cfeb70f617d8017774671d9 *libs/x64/VariantAnnotation.dll
b866ad3fe9b8ea6f25427633af0944f0 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
6e6064d7c429a35bc80235a253eed6f3 *unitTests/cases/VarScan_header.vcf
0c5f14796bf4eb3683ceff8e559f43d7 *unitTests/cases/banded_gvcf.vcf
1e72c29c93e39910d59e569aad8db3db *unitTests/cases/expand.vcf
b94fb85e5ef300d87ab437d75f899b5a *unitTests/cases/fewer-FORMAT-than-GENO.vcf
3e81314c823a90ca24120330c546e7b0 *unitTests/cases/missing-FORMAT-metadata-elt.vcf
ba4c3b28d5f63740fda11e70a19eccd7 *unitTests/cases/mixedStructural.vcf
0230db3391a4a664fd5e2236fd0e5a92 *unitTests/cases/multiple_INFO_fields.vcf
752d9d47c17d8f66791ce8804d88dbf6 *unitTests/cases/negative_FORMAT_Number.vcf
39d8ae8aa155e4bac07e9215017143e7 *unitTests/cases/no_FORMAT_column.vcf
4be0f539f13136116e1df4292adeb571 *unitTests/cases/no_GENO_row.vcf
a99d3b281abdd928c30fd147de3848a0 *unitTests/cases/no_INFO_header.vcf
0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
3756faae9d9fbb654d7e48ae94a4d08a *unitTests/test_SIFTandPolyPhen.R
aa01c6d20520f4516cc76f11b1041b64 *unitTests/test_ScanVcfParam-class.R
4c3f1ff861595bb72517d587f82c4319 *unitTests/test_VCF-class.R
0c04836595400ec35f40ff753728e661 *unitTests/test_VRanges-class.R
061ccc111f0e32b96a82a212c6012434 *unitTests/test_expand-methods.R
2fcea1933cb2a3e2328b75683fd265e2 *unitTests/test_filterVcf.R
d51b86a264c89d287ab21d6195e94215 *unitTests/test_genotypeToSnpMatrix.R
25139d8ce323074afd52e934a93a12a8 *unitTests/test_isSNV.R
26249fa5c8af8875b39ae8c5bd476675 *unitTests/test_locateVariants-methods.R
d57067c435f6f0725ed8875d326e4763 *unitTests/test_predictCoding-methods.R
7a290a572fbe1e8f31767de239fd7ca4 *unitTests/test_readVcf-methods.R
429e9be0afcca4d76d6f075a455dadc5 *unitTests/test_scanVcf.R
e45debe5cc9e5a797032c5ece476a74c *unitTests/test_snpSummary.R
2c1e20a06ce85cb2c363d019d0e21b5f *unitTests/test_summarizeVariants-methods.R
8eb64660335f3d96b3352fa46a47dbe7 *unitTests/test_writeVcf-methods.R
