Package: OncoSimulR
Type: Package
Title: Simulation of cancer progresion with order restrictions
Version: 1.0.0
Date: 2014-07-14
Author: Ramon Diaz-Uriarte.
Maintainer: Ramon Diaz-Uriarte <rdiaz02@gmail.com>
Description: Functions for simulating and plotting cancer progression
        data, including drivers and passengers, and allowing for order
        restrictions. Simulations use continuous-time models (based on
        Bozic et al., 2010 and McFarland et al., 2013) and fitness
        functions account for possible restrictions in the order of
        accumulation of mutations.
biocViews: BiologicalQuestion, SomaticMutation
License: GPL (>= 3)
Depends: R (>= 3.1.0)
Imports: Rcpp (>= 0.11.1), parallel, data.table, graph, Rgraphviz
Suggests: BiocStyle, knitr, Oncotree
LinkingTo: Rcpp
VignetteBuilder: knitr
SystemRequirements: C++11
Packaged: 2014-10-14 05:13:23 UTC; biocbuild
Built: R 3.1.1; i386-w64-mingw32; 2014-10-14 11:30:35 UTC; windows
Archs: i386, x64
