# Gene Expression Signature based Similarity Metric

## Documentation for package ‘GeneExpressionSignature’ version 1.12.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

exampleSet | sample data, a subset of the C-MAP
GeneExpressionSignature | Introduction to the GeneExpressionSignature Package
getRLs | Convert gene expression profiles to a ranked list (data preprocessing)
RankMerging | Merging the ranker lists with the same labels of the biological states into a single list with the Iorio's method.
ScoreGSEA | Compute pairwise distances between samples with method in package GSEA
ScorePGSEA | Compute pairwise distances between samples with method in package PGSEA
SignatureDistance | Compute pairwise distances comprehensively.