Package: ChAMP
Type: Package
Title: Chip Analysis Methylation Pipeline for Illumina
        HumanMethylation450
Version: 1.4.1
Date: 2015-03-22
Description: The package includes quality control metrics, a selection
        of normalization methods and novel methods to identify
        differentially methylated regions and to highlight copy number
        aberrations.
Authors@R: c(person("Tiffany", "Morris", role = c("cre", "aut"),
                    email = "tiffany.morris@ucl.ac.edu"),
             person("Lee", "Butcher", role = "aut"),
             person("Andrew", "Feber", role = "aut"),
	     person("Andrew", "Teschendorff", role = "aut"),
	     person("Ankur", "Chakravarthy", role = "aut"))
License: GPL-3
Depends: R (>= 3.0.1), minfi, ChAMPdata, Illumina450ProbeVariants.db
Imports: sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
        DNAcopy, preprocessCore, impute, marray, wateRmelon,plyr
biocViews: Microarray, MethylationArray, Normalization, TwoChannel,
        CopyNumber
Author: Tiffany Morris [cre, aut],
  Lee Butcher [aut],
  Andrew Feber [aut],
  Andrew Teschendorff [aut],
  Ankur Chakravarthy [aut]
Maintainer: Tiffany Morris <champ450k@gmail.com>
Packaged: 2015-03-23 04:22:11 UTC; biocbuild
Built: R 3.1.3; ; 2015-03-23 06:25:26 UTC; windows
