Package: chimera
Type: Package
Title: A package for secondary analysis of fusion products
Version: 1.8.5
Date: 26 January 2015
Author: Raffaele A Calogero, Matteo Carrara, Marco Beccuti, Francesca Cordero 
Maintainer: Raffaele A Calogero <raffaele.calogero@unito.it>
Depends: Biobase, GenomicRanges (>= 1.13.3), Rsamtools (>= 1.13.1),
        GenomicAlignments, methods, AnnotationDbi, org.Hs.eg.db,
        BSgenome.Hsapiens.UCSC.hg19, TxDb.Hsapiens.UCSC.hg19.knownGene
Suggests: BiocParallel, Rbowtie, geneplotter
Enhances: Rsubread, BSgenome.Mmusculus.UCSC.mm9,
        TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db
Description: This package facilitates the characterisation of fusion products events. It allows to import fusion data results from the following fusion finders:  chimeraScan, bellerophontes, deFuse, FusionFinder, FusionHunter, mapSplice, tophat-fusion, tophat-fusion-post, FusionMap, STAR, Rsubread, fusionCatcher.
biocViews: Infrastructure
SystemRequirements: STAR, TopHat, bowtie and samtools are required for
        some functionalities
License: Artistic-2.0
Packaged: 2015-01-27 03:27:43 UTC; biocbuild
Built: R 3.1.2; x86_64-apple-darwin13.4.0; 2015-01-27 11:58:20 UTC; unix
