Package: netresponse
Type: Package
Title: netresponse: functional network analysis
Version: 1.16.0
Date: 2014-09-14
Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen
Maintainer: Leo Lahti <leo.lahti@iki.fi>
Description: Algorithms for functional network analysis. Includes an
        implementation of a variational Dirichlet process Gaussian
        mixture model for nonparametric mixture modeling.
License: GPL (>=2)
Depends: R (>= 2.15.1), dmt, igraph, infotheo, ggplot2, graph, mclust,
        methods, minet, parallel, qvalue, RColorBrewer, reshape,
        Rgraphviz
URL: https://github.com/antagomir/netresponse
BugReports: https://github.com/antagomir/netresponse/issues
LazyLoad: yes
Collate: 'AllClasses.R' 'AllGenerics.R' 'continuous.responses.R'
        'deprecated.R' 'detect.responses.R'
        'enrichment.list.factor.minimal.R' 'enrichment.list.R'
        'enrichment.score.R' 'enrichment.list.factor.R'
        'factor.responses.R' 'firstlib.R'
        'list.responses.factor.minimal.R' 'listify.groupings.R'
        'toydata.R' 'ICMg.internals.R' 'information.criteria.R'
        'internals.R' 'mixture.densities.R' 'mixtures.R'
        'factor.responses.minimal.R' 'model.stats.R'
        'NetResponseModel-accessors.R' 'order.responses.R'
        'plot-methods.R' 'read.network.R' 'response2sample.R'
        'response.enrichment.R' 'sample2response.R' 'show-methods.R'
        'utilities.R' 'vdp.mixt.R' 'pkg-package.R' 'ICMg.R'
        'visualization.R' 'check.matrix.R' 'check.network.R'
        'filter.netw.R' 'get.mis.R' 'ICMg.get.comp.memberships.R'
        'independent.models.R' 'update.model.pair.R'
        'pick.model.pairs.R' 'list.responses.continuous.R'
        'list.responses.factor.R' 'PlotMixture.R'
        'PlotMixtureUnivariate.R'
biocViews: CellBiology, Clustering, GeneExpression, Genetics, Network,
        GraphAndNetwork, DifferentialExpression, Microarray,
        Transcription
Packaged: 2014-10-14 01:56:51 UTC; biocbuild
Built: R 3.1.1; x86_64-apple-darwin10.8.0; 2014-10-14 14:37:51 UTC; unix
