# GE CodeLink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod)

## Documentation for package ‘hwgcod.db’ version 2.11.0

- DESCRIPTION file.

## Help Pages

hwgcod | Bioconductor annotation data package
hwgcod.db | Bioconductor annotation data package
hwgcodACCNUM | Map Manufacturer identifiers to Accession Numbers
hwgcodALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hwgcodCHR | Map Manufacturer IDs to Chromosomes
hwgcodCHRLENGTHS | A named vector for the length of each of the chromosomes
hwgcodCHRLOC | Map Manufacturer IDs to Chromosomal Location
hwgcodCHRLOCEND | Map Manufacturer IDs to Chromosomal Location
hwgcodENSEMBL | Map Ensembl gene accession numbers with Entrez Gene identifiers
hwgcodENSEMBL2PROBE | Map Ensembl gene accession numbers with Entrez Gene identifiers
hwgcodENTREZID | Map between Manufacturer Identifiers and Entrez Gene
hwgcodENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hwgcodENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
hwgcodGENENAME | Map between Manufacturer IDs and Genes
hwgcodGO | Map between Manufacturer IDs and Gene Ontology (GO)
hwgcodGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hwgcodGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
hwgcodLOCUSID | Map between Manufacturer Identifiers and Entrez Gene
hwgcodMAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
hwgcodMAPCOUNTS | Number of mapped keys for the maps in package hwgcod.db
hwgcodOMIM | Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hwgcodORGANISM | The Organism information for hwgcod
hwgcodORGPKG | The Organism information for hwgcod
hwgcodPATH | Mappings between probe identifiers and KEGG pathway identifiers
hwgcodPATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hwgcodPFAM | Map Manufacturer IDs to Pfam IDs
hwgcodPMID | Map between Manufacturer Identifiers and PubMed Identifiers
hwgcodPMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
hwgcodPROSITE | Map Manufacturer IDs to PROSITE ID
hwgcodREFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
hwgcodSYMBOL | Map between Manufacturer Identifiers and Gene Symbols
hwgcodUNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
hwgcodUNIPROT | Map Uniprot accession numbers with Entrez Gene identifiers
hwgcodUNIPROT2PROBE | Map Uniprot accession numbers with Entrez Gene identifiers
hwgcod_dbconn | Collect information about the package annotation DB
hwgcod_dbfile | Collect information about the package annotation DB
hwgcod_dbInfo | Collect information about the package annotation DB
hwgcod_dbschema | Collect information about the package annotation DB