# PartheenMetaData http://swegene.onk.lu.se Annotation Data (PartheenMetaData)

## Documentation for package ‘PartheenMetaData.db’ version 2.5.0

- DESCRIPTION file.

## Help Pages

PartheenMetaData | Bioconductor annotation data package
PartheenMetaData.db | Bioconductor annotation data package
PartheenMetaDataACCNUM | Map Manufacturer identifiers to Accession Numbers
PartheenMetaDataALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
PartheenMetaDataCHR | Map Manufacturer IDs to Chromosomes
PartheenMetaDataCHRLENGTHS | A named vector for the length of each of the chromosomes
PartheenMetaDataCHRLOC | Map Manufacturer IDs to Chromosomal Location
PartheenMetaDataCHRLOCEND | Map Manufacturer IDs to Chromosomal Location
PartheenMetaDataENSEMBL | Map Ensembl gene accession numbers with Entrez Gene identifiers
PartheenMetaDataENSEMBL2PROBE | Map Ensembl gene accession numbers with Entrez Gene identifiers
PartheenMetaDataENTREZID | Map between Manufacturer Identifiers and Entrez Gene
PartheenMetaDataENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
PartheenMetaDataENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
PartheenMetaDataGENENAME | Map between Manufacturer IDs and Genes
PartheenMetaDataGO | Map between Manufacturer IDs and Gene Ontology (GO)
PartheenMetaDataGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
PartheenMetaDataGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
PartheenMetaDataLOCUSID | Map between Manufacturer Identifiers and Entrez Gene
PartheenMetaDataMAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
PartheenMetaDataMAPCOUNTS | Number of mapped keys for the maps in package PartheenMetaData.db
PartheenMetaDataOMIM | Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
PartheenMetaDataORGANISM | The Organism information for PartheenMetaData
PartheenMetaDataORGPKG | The Organism information for PartheenMetaData
PartheenMetaDataPATH | Mappings between probe identifiers and KEGG pathway identifiers
PartheenMetaDataPATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
PartheenMetaDataPFAM | Map Manufacturer IDs to Pfam IDs
PartheenMetaDataPMID | Map between Manufacturer Identifiers and PubMed Identifiers
PartheenMetaDataPMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
PartheenMetaDataPROSITE | Map Manufacturer IDs to PROSITE ID
PartheenMetaDataREFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
PartheenMetaDataSYMBOL | Map between Manufacturer Identifiers and Gene Symbols
PartheenMetaDataUNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
PartheenMetaDataUNIPROT | Map Uniprot accession numbers with Entrez Gene identifiers
PartheenMetaDataUNIPROT2PROBE | Map Uniprot accession numbers with Entrez Gene identifiers
PartheenMetaData_dbconn | Collect information about the package annotation DB
PartheenMetaData_dbfile | Collect information about the package annotation DB
PartheenMetaData_dbInfo | Collect information about the package annotation DB
PartheenMetaData_dbschema | Collect information about the package annotation DB