GeneAnswers-package	GeneAnswers-package
buildNet	buildNet
caBIO2entrez	caBIO2entrez
categoryNet	categoryNet
chartPlots	chartPlots
class:GeneAnswers	GeneAnswers-class
DmIALite	DmIALite
DO	DO
DO.graph.closure.gene	DO
DO.graph.gene	DO
DO.terms	DO
DO2gene.map	DO
DOLite	DOLite
DOLiteTerm	DOLiteTerm
drawTable	drawTable
entrez2caBIO	entrez2caBIO
gene2DO.map	DO
geneAnnotationHeatmap	geneAnnotationHeatmap
GeneAnswers	GeneAnswers-package
GeneAnswers-class	GeneAnswers-class
geneAnswersBuilder	geneAnswersBuilder
geneAnswersChartPlots	geneAnswersChartPlots
geneAnswersConceptNet	geneAnswersConceptNet
geneAnswersConceptRelation	geneAnswersConceptRelation
geneAnswersConcepts	geneAnswersConcepts
geneAnswersHeatmap	geneAnswersHeatmap
geneAnswersHomoMapping	geneAnswersHomoMapping
geneAnswersReadable	geneAnswersReadable
geneAnswersSort	geneAnswersSort
geneConceptNet	geneConceptNet
geneFunSummarize	geneFunSummarize
getAnnLib	GeneAnswers-class
getAnnLib,GeneAnswers-method	GeneAnswers-class
getcaBIOPATHList	getcaBIOPATHList
getcaBIOPATHTerms	getcaBIOPATHTerms
getCategoryList	getCategoryList
getCategoryTerms	getCategoryTerms
getCategoryType	GeneAnswers-class
getCategoryType,GeneAnswers-method	GeneAnswers-class
getConceptTable	getConceptTable
getConnectedGraph	getConnectedGraph
getDOLiteTerms	getDOLiteTerms
getEnrichmentInfo	GeneAnswers-class
getEnrichmentInfo,GeneAnswers-method	GeneAnswers-class
getGeneExprProfile	GeneAnswers-class
getGeneExprProfile,GeneAnswers-method	GeneAnswers-class
getGeneInput	GeneAnswers-class
getGeneInput,GeneAnswers-method	GeneAnswers-class
getGenesInCategory	GeneAnswers-class
getGenesInCategory,GeneAnswers-method	GeneAnswers-class
getGOList	getGOList
getHomoGeneIDs	getHomoGeneIDs
getMultiLayerGraphIDs	getMultiLayerGraphIDs
getNextGOIDs	getNextGOIDs
getPATHList	getPATHList
getPATHTerms	getPATHTerms
getPValueT	GeneAnswers-class
getPValueT,GeneAnswers-method	GeneAnswers-class
getREACTOMEPATHList	getREACTOMEPATHList
getREACTOMEPATHTerms	getREACTOMEPATHTerms
getSingleLayerGraphIDs	getSingleLayerGraphIDs
getSymbols	getSymbols
getTestType	GeneAnswers-class
getTestType,GeneAnswers-method	GeneAnswers-class
getTotalGeneNumber	getTotalGeneNumber
groupReport	groupReport
HsIALite	HsIALite
humanExpr	humanExpr
humanGeneInput	humanGeneInput
MmIALite	MmIALite
mouseExpr	mouseExpr
mouseGeneInput	mouseGeneInput
plotGeneFunSummary	plotGeneFunSummary
plotGraph	plotGraph
plotOntologyGraph	plotOntologyGraph
RnIALite	RnIALite
sampleGroupsData	sampleGroupsData
saveGeneFunSummary	saveGeneFunSummary
searchEntrez	searchEntrez
setAnnLib	GeneAnswers-class
setAnnLib,GeneAnswers-method	GeneAnswers-class
setCategoryType	GeneAnswers-class
setCategoryType,GeneAnswers-method	GeneAnswers-class
setEnrichmentInfo	GeneAnswers-class
setEnrichmentInfo,GeneAnswers-method	GeneAnswers-class
setGeneExprProfile	GeneAnswers-class
setGeneExprProfile,GeneAnswers-method	GeneAnswers-class
setGeneInput	GeneAnswers-class
setGeneInput,GeneAnswers-method	GeneAnswers-class
setGenesInCategory	GeneAnswers-class
setGenesInCategory,GeneAnswers-method	GeneAnswers-class
setPValueT	GeneAnswers-class
setPValueT,GeneAnswers-method	GeneAnswers-class
setTestType	GeneAnswers-class
setTestType,GeneAnswers-method	GeneAnswers-class
show	GeneAnswers-class
show,GeneAnswers-method	GeneAnswers-class
simplifyGeneFunSummary	simplifyGeneFunSummary
summary	GeneAnswers-class
summary,GeneAnswers-method	GeneAnswers-class
topcaBIO.PATH	topcaBIO.PATH
topcaBIO.PATHGenes	caBIO.PATHGenes
topCategory	topCategory
topCategoryGenes	topCategoryGenes
topDOLITE	topDOLITE
topDOLITEGenes	topDOLITEGenes
topGO	topGO
topGOGenes	topGOGenes
topPATH	topPATH
topPATHGenes	topPATHGenes
topREACTOME.PATH	topREACTOME.PATH
topREACTOME.PATHGenes	topREACTOME.PATHGenes
