Package: GOSemSim
Type: Package
Title: GO-terms Semantic Similarity Measures
Version: 1.10.2
Author: Guangchuang Yu
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: Implemented five methods proposed by Resnik, Schlicker,
        Jiang, Lin and Wang respectively for estimating GO semantic
        similarities. Support many species, including Anopheles,
        Arabidopsis, Bovine, Canine, Chicken, Chimp, Coelicolor, E coli
        strain K12 and Sakai, Fly, Human, Malaria, Mouse, Pig, Rhesus,
        Rat, Worm, Xenopus, Yeast, and Zebrafish.
Depends:
Imports: methods, AnnotationDbi, GO.db, org.Hs.eg.db, org.Ag.eg.db,
        org.At.tair.db, org.Bt.eg.db, org.Ce.eg.db, org.Cf.eg.db,
        org.Dm.eg.db, org.Dr.eg.db, org.EcK12.eg.db, org.EcSakai.eg.db,
        org.Gg.eg.db, org.Mm.eg.db, org.Mmu.eg.db, org.Pf.plasmo.db,
        org.Pt.eg.db, org.Rn.eg.db, org.Sc.sgd.db, org.Sco.eg.db,
        org.Ss.eg.db, org.Xl.eg.db
Suggests: clusterProfiler
biocViews: GO, Clustering, Pathways, Anopheles_gambiae,
        Arabidopsis_thaliana, Bos_taurus, Caenorhabditis_elegans,
        Canis_familiaris, Danio_rerio, Drosophila_melanogaster,
        Escherichia_coli, Gallus_gallus, Homo_sapiens, Mus_musculus,
        Pan_troglodytes, Plasmodium_falciparum, Rattus_norvegicus,
        Saccharomyces_cerevisiae, Streptomyces_coelicolor, Sus_scrofa,
        Xenopus_laevis
Collate: utilities.R zzz.R AllGenerics.R ClassGeneClusterSet.R
        ClassGeneSet.R ClassGOSet.R ClassParams.R oldFunctionCall.R
License: GPL-2
Packaged: 2011-07-08 22:33:47 UTC; biocbuild
Built: R 2.13.0; ; 2011-07-09 04:37:36 UTC; windows
