buildUpstreamSeqs2 {harbChIP} | R Documentation

## workflow component – build an upstreamSeqs instance from a FASTA read

### Description

workflow component – build an upstreamSeqs instance from a FASTA read

### Usage

    buildUpstreamSeqs2(fastaRead, organism="sce", provenance="harmen")

### Arguments

`fastaRead` | results of a readFASTA from Biostrings
`organism` | string naming organism
`provenance` | string or structure describing provenance

### Details

generates an instance of upstreamSeqs

### Value

generates an instance of upstreamSeqs

### Author(s)

Vince Carey <stvjc@channing.harvard.edu>

### Examples

    # x = readFASTA(...)
    # y = buildUpstreamSeqs2(x)

[Package harbChIP version 1.0.0 Index]