zebrafishUNIPROT {zebrafish.db} | R Documentation

## Map Uniprot accession numbers with Entrez Gene identifiers

### Description

zebrafishUNIPROT is an R object that contains mappings between Entrez Gene identifiers and Uniprot accession numbers.

### Details

This object is a simple mapping of Entrez Gene identifiers http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene to Uniprot Accessions.

Mappings were based on data provided by: Entrez Gene ( ftp://ftp.ncbi.nlm.nih.gov/gene/DATA ) on 2009-Mar11

### Examples

        x <- zebrafishUNIPROT
        # Get the entrez gene IDs that are mapped to an Uniprot ID
        mapped_genes <- mappedkeys(x)
        # Convert to a list
        xx <- as.list(x[mapped_genes])
        if(length(xx) > 0) {
          # Get the Uniprot IDs for the first five genes
          xx[1:5]
          # Get the first one
          xx[[1]]
        }

[Package zebrafish.db version 2.2.11 Index]