sysptmPTMTYPE {sysptm.db} | R Documentation

## Map site to the type of posttranslational modifications

### Description

sysptmPTMTYPE maps a site to the type of posttranslational modifications (PTMs). The site is consisted of SysPTM protein identifer, start position of PTM, and end position of PTM.

### Details

Mappings were based on data provided by: SysPTM (http://www.biosino.org/papers/SysPTM/Current/ptm ; http://www.biosino.org/papers/SysPTM/Current/name ; http://www.biosino.org/papers/SysPTM/Current/Protein_ID_equal) on v1.1, 2008-11-20

### Examples

     # Convert to a list
     xx <- as.list(sysptmPTMTYPE)
     # Get the values for a few keys
     if(length(xx) >= 3){
       xx[1:3]
     }

     ## For the reverse map sysptmPTMTYPE2SITE
     xx <- as.list(sysptmPTMTYPE2SITE)
     if(length(xx) > 0){
         ## Get the first one
         xx[[1]]
     }

[Package sysptm.db version 1.1.0 Index]