sysptmIDs             package:sysptm.db             R Documentation

_M_a_p _S_y_s_P_T_M _p_r_o_t_e_i_n _i_d_e_n_t_i_f_i_e_r_s _t_o _e_x_t_e_r_n_a_l _i_d_e_n_t_i_f_i_e_r_s

_D_e_s_c_r_i_p_t_i_o_n:

     sysptmIDs maps SysPTM protein identifiers to external protein
     identifiers.

_D_e_t_a_i_l_s:

     Each SysPTM protein identifier maps to a named vector containing
     protein identifiers from public databases, such as Swiss-Prot,
     IPI, NCBI RefSeq, and so on. The vector name corresponds to the
     public database.

     Mappings were based on data provided by: SysPTM (<URL:
     http://www.biosino.org/papers/SysPTM/Current/ptm ;
     http://www.biosino.org/papers/SysPTM/Current/name ;
     http://www.biosino.org/papers/SysPTM/Current/Protein_ID_equal>) on
     v1.1, 2008-11-20

_E_x_a_m_p_l_e_s:

          # Convert to a list
          xx <- as.list(sysptmIDs)
          xx <- xx[!is.na(xx)]
          if(length(xx) > 0){
              xx[1:5]
          }

