lumiMouseIDMapping    package:lumiMouseIDMapping    R Documentation

_I_l_l_u_m_i_n_a _I_D _M_a_p_p_i_n_g _i_n_f_o_r_m_a_t_i_o_n _o_f _a_l_l _M_o_u_s_e _e_x_p_r_e_s_s_i_o_n _c_h_i_p_s

_D_e_s_c_r_i_p_t_i_o_n:

     Welcome to the lumiMouseIDMapping ID mapping Package.  The purpose
     of this package is to provide ID mappings between different types
     of Illumina identifiers of Mouse Expression chips and nuIDs, and
     also mappings from nuIDs to the the most recent Mus musculus
     RefSeq release. The library includes the data tables corresponding
      to all released Illumian Mouse Expression chips before the
     package releasing date. Each table includes columns "Search_key"
     ("Search_Key"), "Target" ("ILMN_Gene"), "Accession", "Symbol",
     "ProbeId" ("Probe_Id") and "nuID". It also includes a
     nuID_MappingInfo table, which keeps the mapping information of
     nuID to RefSeq ID and its related mapping quality information.
     Another table, metadata, keeps other information, like RefSeq
     version, species. The package is supposed to be used together with
     the Bioconductor lumi package.

     You can learn what objects this package supports with the
     following command:

     'ls("package:lumiMouseIDMapping")' 

     Each of these objects has their own manual page detailing where
     relevant data was obtained along with some examples of how to use
     it.

_E_x_a_m_p_l_e_s:

       ls("package:lumiMouseIDMapping")

