plot_EvG-methods           package:GGBase           R Documentation

_f_o_r_m_a_l _m_e_t_h_o_d _f_o_r _v_i_s_u_a_l_i_z_i_n_g _e_x_p_r_e_s_s_i_o_n _d_i_s_t_r_i_b_u_t_i_o_n_s _v_s _g_e_n_o_t_y_p_e

_D_e_s_c_r_i_p_t_i_o_n:

     boxplot expression vs genotype

_M_e_t_h_o_d_s:



     _g_s_y_m = "_g_e_n_e_s_y_m", _r_s_i_d = "_r_s_i_d", _s_m_s = "_s_m_l_S_e_t" generates an
          annotated boxplot 

     _m_u_l_t_i_s_n_p _m_e_t_h_o_d_s plot_EvG2 allows specification of a second SNP
          rsid and shows boxplots over the cross-tabulation of the
          allele combinations

_E_x_a_m_p_l_e_s:

     library(GGtools)
     data(hmceuB36.2021)
     plot_EvG(genesym("CPNE1"), rsid("rs6060535"), hmceuB36.2021)

