yeastData-class            package:ScISI            R Documentation

_C_l_a_s_s "_y_e_a_s_t_D_a_t_a"

_D_e_s_c_r_i_p_t_i_o_n:

     A class representing an interactome of yeast. The object is in the
     form of a dataframe with three generic methods. The methods take
     two arguments: the first is the instance of the class yeastData;
     the second is the name of a protein complex with respect as given
     by the bi-partite graph incidence matrix.

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("yeastData",
     reference = dataFrameISI)'.

_S_l_o_t_s:


     _y_e_a_s_t_D_a_t_a: The yeastData slot is merely a data frame for some in
          silico interactome.

_M_e_t_h_o_d_s:


     _I_D 'signature(object = "yeastData", name = "character")': ... 

     _D_e_s_c 'signature(object = "yeastData", name = "character")': ... 

     _g_e_t_U_R_L 'signature(object = "yeastData", name = "character")': ... 

_A_u_t_h_o_r(_s):

     Tony Chiang

_E_x_a_m_p_l_e_s:

     #go = getGOInfo(wantAllComplexes = FALSE)
     #goM = createGOMatrix(go)
     #cNames = colnames(goM)
     #goDF = createGODataFrame(go, goM)
     #goOb = createYeastObj(goDF)
     #ID(goOb, cNames[5])
     #Desc(goOb, cNames[5])
     #getUrl(goOb, cNames[5])

