createMipsDataFrame          package:ScISI          R Documentation

_A _f_u_n_c_t_i_o_n _t_h_a_t _c_r_e_a_t_e_s _a _d_a_t_a _f_r_a_m_e _f_r_o_m _t_h_e _M_I_P_S _D_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     This function takes two parameters: (1) a named vector that has a
     description of the MIPS protein complexes (this vector is one of
     the two outputs from 'getMipsInfo' referenced by DESC); (2) the
     matrix representation of the bipartite graph. The output of the
     function is a dataframe with three columns: the names of the
     complexes in the matrix; the ID of the corresponding complex; the
     description of the corresponding complex.

_U_s_a_g_e:

     createMipsDataFrame(desc, mips)

_A_r_g_u_m_e_n_t_s:

    desc: A named character vector (where the name is the MIPS ID for
          each protein complex obtained by 'getMipsInfo') whose entries
          describe the corrsponding protein complex.

    mips: The matrix representation of the protein complex membership
          graph for the MIPS protein complexes

_V_a_l_u_e:

     The return value is a data frame with three coluumns: the names
     column records the names of the protein complexes as indexed in
     the incidence matrix; the ID column records the MIPS ID that
     corresponds to each protein complex; the Desc column describes
     each of the protein complexes.

_A_u_t_h_o_r(_s):

     Tony Chiang

_R_e_f_e_r_e_n_c_e_s:

     mips.gsf.de

