subsetting               package:CALIB               R Documentation

_S_u_b_s_e_t _o_f _R_G_L_i_s_t__C_A_L_I_B, _S_p_i_k_e_L_i_s_t _o_r _P_a_r_a_m_e_t_e_r_L_i_s_t _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     Exact a subset of an RGList_CALIB, SpikeList or ParameterList
     object.

_U_s_a_g_e:

      ## S3 method for class 'RGList_CALIB':
      object[i, j, ...]

_A_r_g_u_m_e_n_t_s:

  object: an object of class 'RGList_CALIB' or 'SpikeList'.

     i,j: subscripts. 'i' is the subscripts of the spots  and 'j' is
          the subscripts of the arrays.

     ...: not used

_D_e_t_a_i_l_s:

     'i','j' may take any values acceptable for the matrix components
     of 'object'. see the 'exact' in the base package for more details.

_V_a_l_u_e:

     An object of the same class as 'object' containing the data with
     specified subset of spots and arrays.

_A_u_t_h_o_r(_s):

     Hui Zhao

_R_e_f_e_r_e_n_c_e_s:

     'subsetting' in limma package

_S_e_e _A_l_s_o:

     'exact' in the base package

     'subsetting' in the limma package

_E_x_a_m_p_l_e_s:

     # for RGList_CALIB
     R <- G <- matrix(1:8,4,2)
     rownames(R) <- rownames(G) <- c("g1","g2","g3","g4")
     colnames(R) <- colnames(G) <- c("a1","a2")
     RG <- new("RGList_CALIB",list(R=R,G=G))

     RG[1:2,]
     RG[,1:2]
     RG[1:2,1:2]

