plotTIC-methods             package:xcms             R Documentation

_P_l_o_t _t_o_t_a_l _i_o_n _c_o_u_n_t

_D_e_s_c_r_i_p_t_i_o_n:

     Plot chromatogram of total ion count. Optionally allow
     identification of target peaks and viewing/identification of
     individual spectra.

_A_r_g_u_m_e_n_t_s:

  object: the 'xcmsRaw' object

   ident: logical, use mouse to identify and label chromatographic
          peaks 

   ident: logical, use mouse to identify and label spectral peaks 

_V_a_l_u_e:

     If 'ident == TRUE', an integer vector with the indecies of the
     points that were identified. Otherwise a two-column matrix with
     the plotted points.

_M_e_t_h_o_d_s:


     _o_b_j_e_c_t = "_x_c_m_s_R_a_w" 'plotTIC(object, ident = FALSE, msident =
          FALSE)'


_S_e_e _A_l_s_o:

     'xcmsRaw-class'

