\HeaderA{rawEIC-methods}{Get extracted ion chromatograms for specified m/z range}{rawEIC.Rdash.methods}
\aliasA{rawEIC}{rawEIC-methods}{rawEIC}
\aliasA{rawEIC,xcmsRaw-method}{rawEIC-methods}{rawEIC,xcmsRaw.Rdash.method}
\keyword{methods}{rawEIC-methods}
\begin{Description}\relax
Generate extracted ion chromatogram for m/z values of interest. The raw data is used in contrast to  \code{\LinkA{getEIC}{getEIC}} which uses data from the profile matrix.
\end{Description}
\begin{Arguments}
\begin{ldescription}
\item[\code{object}] \code{xcmsRaw} object
\item[\code{massrange}] m/z range for EIC

\item[\code{scanrange}] scan range for EIC

\end{ldescription}
\end{Arguments}
\begin{Value}
A list of :

\begin{ldescription}
\item[\code{scan}] scan number

\item[\code{intensity}] added intensity values

\end{ldescription}
\end{Value}
\begin{Section}{Methods}
\describe{
\item[object = "xcmsRaw"] \code{
    rawEIC(object, massrange, scanrange=c(1,length(object@scantime)))
  }

}
\end{Section}
\begin{Author}\relax
Ralf Tautenhahn, \email{rtautenh@ipb-halle.de}
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{xcmsRaw-class}{xcmsRaw.Rdash.class}}
\end{SeeAlso}

